FFCP PHASE1:Hg19::chr15:101397445..101397450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:101397445..101397450,+ | |||
|coexpression_cluster_id=C3473 | |coexpression_cluster_id=C3473 | ||
|description=CAGE_peak_at_chr15:101397445..101397450,+ | |description=CAGE_peak_at_chr15:101397445..101397450,+ | ||
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|ontology_enrichment_celltype=CL:0000066!5.14e-07!254 | |ontology_enrichment_celltype=CL:0000066!5.14e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000415;8.70e-20;2 | |ontology_enrichment_celltype_v019=CL:1000415;8.70e-20;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.67e-20,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.04e-11;1 | |ontology_enrichment_development_v019=UBERON:0005425;9.04e-11;1 | ||
|ontology_enrichment_disease=DOID:0050687!5.62e-20!143;DOID:305!9.16e-20!106;DOID:1749!7.99e-14!14;DOID:14566!6.55e-12!239;DOID:162!1.20e-11!235 | |ontology_enrichment_disease=DOID:0050687!5.62e-20!143;DOID:305!9.16e-20!106;DOID:1749!7.99e-14!14;DOID:14566!6.55e-12!239;DOID:162!1.20e-11!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.60e-24;14!DOID:3119;2.34e-11;14!DOID:0050619;9.04e-11;1!DOID:1357;9.04e-11;1!DOID:0050615;9.10e-10;16!DOID:3908;1.11e-08;5 | |ontology_enrichment_disease_v019=DOID:1749;6.60e-24;14!DOID:3119;2.34e-11;14!DOID:0050619;9.04e-11;1!DOID:1357;9.04e-11;1!DOID:0050615;9.10e-10;16!DOID:3908;1.11e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,8.60e-24,14;DOID:305,2.44e-15,106;DOID:0050687,1.37e-12,143;DOID:3119,2.32e-11,14;DOID:0050619,1.46e-10,1;DOID:1357,1.46e-10,1;DOID:0050615,1.06e-09,16;DOID:162,5.44e-09,235;DOID:14566,9.55e-09,239;DOID:3908,1.22e-08,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.60e-13;3!UBERON:0002294;6.46e-13;7!UBERON:0001173;6.46e-13;7!UBERON:0004913;2.65e-11;1!UBERON:0003703;2.65e-11;1!UBERON:0001174;2.65e-11;1!UBERON:0004914;2.65e-11;1!UBERON:0000997;3.57e-11;1!UBERON:0005056;3.57e-11;1!UBERON:0004176;3.57e-11;1!UBERON:0000941;9.04e-11;1!UBERON:0001764;9.04e-11;1!UBERON:0001785;9.04e-11;1!UBERON:0002464;9.04e-11;1!UBERON:0004904;9.04e-11;1!UBERON:0001825;9.04e-11;1!UBERON:0001021;9.04e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0002110;1.60e-13;3!UBERON:0002294;6.46e-13;7!UBERON:0001173;6.46e-13;7!UBERON:0004913;2.65e-11;1!UBERON:0003703;2.65e-11;1!UBERON:0001174;2.65e-11;1!UBERON:0004914;2.65e-11;1!UBERON:0000997;3.57e-11;1!UBERON:0005056;3.57e-11;1!UBERON:0004176;3.57e-11;1!UBERON:0000941;9.04e-11;1!UBERON:0001764;9.04e-11;1!UBERON:0001785;9.04e-11;1!UBERON:0002464;9.04e-11;1!UBERON:0004904;9.04e-11;1!UBERON:0001825;9.04e-11;1!UBERON:0001021;9.04e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,9.00e-14,3;UBERON:0006242,9.00e-14,3;UBERON:0004913,2.53e-11,1;UBERON:0003703,2.53e-11,1;UBERON:0001174,2.53e-11,1;UBERON:0004914,2.53e-11,1;UBERON:0000997,4.15e-11,1;UBERON:0005056,4.15e-11,1;UBERON:0000941,7.46e-11,1;UBERON:0001785,7.46e-11,1;UBERON:0002464,7.46e-11,1;UBERON:0004904,7.46e-11,1;UBERON:0001021,7.46e-11,1;UBERON:0003902,7.46e-11,1;UBERON:0005425,7.46e-11,1;UBERON:0001764,1.46e-10,1;UBERON:0001825,1.46e-10,1;UBERON:0002294,2.70e-10,9;UBERON:0001173,2.70e-10,9;UBERON:0004912,2.70e-10,9 | |||
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| ||
|short_description=p@chr15:101397445..101397450,+ | |short_description=p@chr15:101397445..101397450,+ | ||
}} | }} |
Latest revision as of 00:17, 25 July 2015
Short description: | p@chr15:101397445..101397450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:101397445..101397450, + |
Coexpression cluster: | C3473_bronchioalveolar_papillotubular_gastric_gall_squamous_malignant_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.67e-20 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 9.00e-14 | 3 |
gall bladder primordium | 9.00e-14 | 3 |
hepatopancreatic ampulla | 2.53e-11 | 1 |
extrahepatic bile duct | 2.53e-11 | 1 |
common bile duct | 2.53e-11 | 1 |
duodenal papilla | 2.53e-11 | 1 |
mammalian vulva | 4.15e-11 | 1 |
external female genitalia | 4.15e-11 | 1 |
cranial nerve II | 7.46e-11 | 1 |
cranial nerve | 7.46e-11 | 1 |
nerve trunk | 7.46e-11 | 1 |
nerve connecting eye with brain | 7.46e-11 | 1 |
nerve | 7.46e-11 | 1 |
retinal neural layer | 7.46e-11 | 1 |
presumptive neural retina | 7.46e-11 | 1 |
maxillary sinus | 1.46e-10 | 1 |
paranasal sinus | 1.46e-10 | 1 |
biliary system | 2.70e-10 | 9 |
biliary tree | 2.70e-10 | 9 |
biliary bud | 2.70e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.60e-24 | 14 |
carcinoma | 2.44e-15 | 106 |
cell type cancer | 1.37e-12 | 143 |
gastrointestinal system cancer | 2.32e-11 | 14 |
paranasal sinus cancer | 1.46e-10 | 1 |
maxillary sinus cancer | 1.46e-10 | 1 |
respiratory system cancer | 1.06e-09 | 16 |
cancer | 5.44e-09 | 235 |
disease of cellular proliferation | 9.55e-09 | 239 |
non-small cell lung carcinoma | 1.22e-08 | 5 |