FFCP PHASE1:Hg19::chr14:64559917..64559954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:64559917..64559954,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr14:64559917..64559954,+ | |description=CAGE_peak_at_chr14:64559917..64559954,+ | ||
|id=chr14:64559917..64559954,+ | |id=chr14:64559917..64559954,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.67e-17!43;CL:0000223!1.71e-11!59;CL:0000622!9.56e-11!5;CL:0002251!1.15e-10!21;CL:0002623!2.12e-10!3;CL:0000154!5.86e-09!6;CL:0002537!6.79e-07!5 | |ontology_enrichment_celltype=CL:0002076!2.67e-17!43;CL:0000223!1.71e-11!59;CL:0000622!9.56e-11!5;CL:0002251!1.15e-10!21;CL:0002623!2.12e-10!3;CL:0000154!5.86e-09!6;CL:0002537!6.79e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.19e-12;5!CL:1000415;2.48e-08;2!CL:0002535;2.48e-08;2!CL:0000349;2.08e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.19e-12,5;CL:0002535,2.48e-08,2;CL:1000415,2.67e-08,2;CL:0000349,2.04e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.38e-15;1!UBERON:0008814;2.48e-08;2!UBERON:0010056;2.48e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;8.02e-16;1!DOID:326;8.02e-16;1!DOID:3978;8.02e-16;1!DOID:3394;8.02e-16;1!DOID:5844;8.02e-16;1!DOID:114;1.44e-08;2!DOID:3910;2.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.46e-16,1;DOID:326,7.46e-16,1;DOID:3978,7.46e-16,1;DOID:3394,7.46e-16,1;DOID:5844,7.46e-16,1;DOID:114,1.39e-08,2;DOID:3910,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.22e-09!72;UBERON:0000166!1.08e-08!21;UBERON:0005631!5.77e-08!14;UBERON:0000158!5.77e-08!14;UBERON:0004119!7.13e-08!169;UBERON:0000925!7.13e-08!169;UBERON:0006595!7.13e-08!169;UBERON:0000165!8.47e-08!28;UBERON:0000930!8.47e-08!28;UBERON:0000161!3.45e-07!35 | |ontology_enrichment_uberon=UBERON:0001004!5.22e-09!72;UBERON:0000166!1.08e-08!21;UBERON:0005631!5.77e-08!14;UBERON:0000158!5.77e-08!14;UBERON:0004119!7.13e-08!169;UBERON:0000925!7.13e-08!169;UBERON:0006595!7.13e-08!169;UBERON:0000165!8.47e-08!28;UBERON:0000930!8.47e-08!28;UBERON:0000161!3.45e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.02e-16;1!UBERON:0005631;1.41e-13;10!UBERON:0000158;1.41e-13;10!UBERON:0000305;2.69e-09;7!UBERON:0000341;1.73e-08;2!UBERON:0004903;2.48e-08;2!UBERON:0006955;2.48e-08;2!UBERON:0004801;2.48e-08;2!UBERON:0002173;2.48e-08;2!UBERON:0002186;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,8.63e-16,1;UBERON:0005631,7.04e-10,14;UBERON:0000158,7.04e-10,14;UBERON:0000305,2.69e-09,7;UBERON:0000341,1.86e-08,2;UBERON:0006955,2.48e-08,2;UBERON:0004801,2.48e-08,2;UBERON:0004871,3.04e-08,8;UBERON:0004903,3.08e-08,2;UBERON:0002173,3.08e-08,2;UBERON:0002186,3.08e-08,2 | |||
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| ||
|short_description=p@chr14:64559917..64559954,+ | |short_description=p@chr14:64559917..64559954,+ | ||
}} | }} |
Latest revision as of 21:50, 24 July 2015
Short description: | p@chr14:64559917..64559954, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:64559917..64559954, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.19e-12 | 5 |
epithelial cell of cervix | 2.48e-08 | 2 |
epithelial cell of gall bladder | 2.67e-08 | 2 |
extraembryonic cell | 2.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface | 8.63e-16 | 1 |
extraembryonic membrane | 7.04e-10 | 14 |
membranous layer | 7.04e-10 | 14 |
amnion | 2.69e-09 | 7 |
throat | 1.86e-08 | 2 |
uterine epithelium | 2.48e-08 | 2 |
cervix epithelium | 2.48e-08 | 2 |
somatic layer of lateral plate mesoderm | 3.04e-08 | 8 |
bronchoalveolar duct junction | 3.08e-08 | 2 |
alveolar duct | 3.08e-08 | 2 |
bronchiole | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.46e-16 | 1 |
ischemia | 7.46e-16 | 1 |
extrinsic cardiomyopathy | 7.46e-16 | 1 |
myocardial ischemia | 7.46e-16 | 1 |
myocardial infarction | 7.46e-16 | 1 |
heart disease | 1.39e-08 | 2 |
lung adenocarcinoma | 3.08e-08 | 2 |