FFCP PHASE1:Hg19::chr14:64559863..64559877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:64559863..64559877,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr14:64559863..64559877,+ | |description=CAGE_peak_at_chr14:64559863..64559877,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.03e-14!43;CL:0000622!1.63e-11!5;CL:0002623!4.58e-11!3;CL:0000154!1.34e-09!6;CL:0000223!1.86e-09!59;CL:0002251!5.40e-07!21 | |ontology_enrichment_celltype=CL:0002076!3.03e-14!43;CL:0000622!1.63e-11!5;CL:0002623!4.58e-11!3;CL:0000154!1.34e-09!6;CL:0000223!1.86e-09!59;CL:0002251!5.40e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002537;7.92e-19;5!CL:0002535;3.06e-12;2!CL:0000322;1.08e-08;3 | |ontology_enrichment_celltype_v019=CL:0002537;7.92e-19;5!CL:0002535;3.06e-12;2!CL:0000322;1.08e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.92e-19,5;CL:0002535,2.90e-12,2;CL:0000322,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.19e-12;2!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10 | |ontology_enrichment_development_v019=UBERON:0007297;2.19e-12;2!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;2.19e-12;2 | |ontology_enrichment_disease_v019=DOID:3910;2.19e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.00e-09!169;UBERON:0000925!1.00e-09!169;UBERON:0006595!1.00e-09!169;UBERON:0001007!2.60e-09!155;UBERON:0001555!2.60e-09!155;UBERON:0007026!2.60e-09!155;UBERON:0001004!2.21e-08!72;UBERON:0000341!2.75e-08!2;UBERON:0000464!1.90e-07!104;UBERON:0000166!3.63e-07!21;UBERON:0005178!9.97e-07!34;UBERON:0002224!9.97e-07!34 | |ontology_enrichment_uberon=UBERON:0004119!1.00e-09!169;UBERON:0000925!1.00e-09!169;UBERON:0006595!1.00e-09!169;UBERON:0001007!2.60e-09!155;UBERON:0001555!2.60e-09!155;UBERON:0007026!2.60e-09!155;UBERON:0001004!2.21e-08!72;UBERON:0000341!2.75e-08!2;UBERON:0000464!1.90e-07!104;UBERON:0000166!3.63e-07!21;UBERON:0005178!9.97e-07!34;UBERON:0002224!9.97e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.34e-23;1!UBERON:0000305;9.53e-14;7!UBERON:0004903;2.19e-12;2!UBERON:0002173;2.19e-12;2!UBERON:0002186;2.19e-12;2!UBERON:0006955;3.06e-12;2!UBERON:0004801;3.06e-12;2!UBERON:0004175;4.65e-10;21!UBERON:0005631;6.48e-10;10!UBERON:0000158;6.48e-10;10!UBERON:0000058;8.09e-10;10!UBERON:0004821;1.08e-08;3!UBERON:0007499;1.08e-08;3!UBERON:0003215;1.08e-08;3!UBERON:0010368;1.08e-08;3!UBERON:0009911;1.08e-08;3!UBERON:0002299;1.08e-08;3!UBERON:0006947;1.08e-08;3!UBERON:0006524;1.08e-08;3!UBERON:0008874;1.08e-08;3!UBERON:0002169;1.08e-08;3!UBERON:0004894;1.08e-08;3!UBERON:0004054;1.08e-08;3!UBERON:0005904;7.91e-07;4!UBERON:0009856;7.91e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001301;2.34e-23;1!UBERON:0000305;9.53e-14;7!UBERON:0004903;2.19e-12;2!UBERON:0002173;2.19e-12;2!UBERON:0002186;2.19e-12;2!UBERON:0006955;3.06e-12;2!UBERON:0004801;3.06e-12;2!UBERON:0004175;4.65e-10;21!UBERON:0005631;6.48e-10;10!UBERON:0000158;6.48e-10;10!UBERON:0000058;8.09e-10;10!UBERON:0004821;1.08e-08;3!UBERON:0007499;1.08e-08;3!UBERON:0003215;1.08e-08;3!UBERON:0010368;1.08e-08;3!UBERON:0009911;1.08e-08;3!UBERON:0002299;1.08e-08;3!UBERON:0006947;1.08e-08;3!UBERON:0006524;1.08e-08;3!UBERON:0008874;1.08e-08;3!UBERON:0002169;1.08e-08;3!UBERON:0004894;1.08e-08;3!UBERON:0004054;1.08e-08;3!UBERON:0005904;7.91e-07;4!UBERON:0009856;7.91e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.10e-23,1;UBERON:0000305,9.53e-14,7;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0004871,3.74e-12,8;UBERON:0006947,1.04e-08,3;UBERON:0004054,1.04e-08,3;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0004175,1.53e-08,25;UBERON:0002113,2.52e-08,26;UBERON:0003918,2.52e-08,26;UBERON:0011143,2.52e-08,26;UBERON:0005095,2.52e-08,26;UBERON:0007687,2.52e-08,26;UBERON:0005631,2.44e-07,14;UBERON:0000158,2.44e-07,14;UBERON:0000489,4.48e-07,31;UBERON:0005904,7.70e-07,4 | |||
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| ||
|short_description=p@chr14:64559863..64559877,+ | |short_description=p@chr14:64559863..64559877,+ | ||
}} | }} |
Latest revision as of 21:50, 24 July 2015
Short description: | p@chr14:64559863..64559877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:64559863..64559877, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.92e-19 | 5 |
epithelial cell of cervix | 2.90e-12 | 2 |
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.10e-23 | 1 |
amnion | 9.53e-14 | 7 |
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
uterine epithelium | 2.90e-12 | 2 |
cervix epithelium | 2.90e-12 | 2 |
somatic layer of lateral plate mesoderm | 3.74e-12 | 8 |
male genital duct | 1.04e-08 | 3 |
internal male genitalia | 1.04e-08 | 3 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
internal genitalia | 1.53e-08 | 25 |
kidney | 2.52e-08 | 26 |
kidney mesenchyme | 2.52e-08 | 26 |
upper urinary tract | 2.52e-08 | 26 |
kidney rudiment | 2.52e-08 | 26 |
kidney field | 2.52e-08 | 26 |
extraembryonic membrane | 2.44e-07 | 14 |
membranous layer | 2.44e-07 | 14 |
cavitated compound organ | 4.48e-07 | 31 |
duct of male reproductive system | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.32e-12 | 2 |