FFCP PHASE1:Hg19::chr14:37317667..37317675,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:37317667..37317675,+
|short_description=p@chr14:37317667..37317675,+
|description=CAGE_peak_at_chr14:37317667..37317675,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:37317667..37317675,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr14:37317667..37317675,+ | |||
|id=chr14:37317667..37317675,+ | |||
|ontology_enrichment_celltype=CL:0002178!2.66e-07!3;CL:0002504!4.13e-07!3;CL:1000279!4.13e-07!3;CL:1000280!4.13e-07!3;CL:0000039!8.52e-07!7;CL:0000586!8.52e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.49e-23;1!CL:0000164;1.49e-23;1!CL:0000502;1.49e-23;1!CL:0000172;1.49e-23;1!CL:0000173;1.49e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.34e-23,1;CL:0000164,1.34e-23,1;CL:0000502,1.34e-23,1;CL:0000172,1.34e-23,1;CL:0000173,1.34e-23,1;CL:0002351,1.34e-23,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.49e-23;1!UBERON:0008801;4.59e-23;1 | |||
|ontology_enrichment_disease=DOID:3095!3.15e-13!22;DOID:2994!3.15e-13!22;DOID:171!1.98e-12!10;DOID:1287!2.35e-11!4;DOID:74!1.46e-10!2;DOID:0050687!2.99e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.49e-23;1!DOID:171;1.73e-20;10!DOID:169;9.04e-16;6!DOID:3095;1.08e-09;22!DOID:2994;1.08e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.34e-23,1;DOID:171,1.79e-20,10;DOID:169,8.39e-16,6;DOID:3095,1.09e-09,22;DOID:2994,1.09e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.00e-45;2!UBERON:0005058;5.00e-45;2!UBERON:0009113;5.00e-45;2!UBERON:0001831;4.59e-23;1!UBERON:0001567;4.59e-23;1!UBERON:0004177;1.04e-18;5!UBERON:0005057;1.04e-18;5!UBERON:0001829;3.06e-12;2!UBERON:0004089;3.06e-12;2!UBERON:0002346;9.36e-07;4!UBERON:0000923;9.36e-07;4!UBERON:0010316;9.36e-07;4!UBERON:0005291;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.60e-23,4;UBERON:0005058,4.60e-23,4;UBERON:0009113,4.60e-23,4;UBERON:0003295,4.60e-23,4;UBERON:0005562,4.60e-23,4;UBERON:0001831,5.13e-23,1;UBERON:0001567,5.13e-23,1;UBERON:0008801,5.13e-23,1;UBERON:0003408,1.91e-20,10;UBERON:0003351,9.74e-16,6;UBERON:0004177,1.23e-13,7;UBERON:0005057,1.23e-13,7;UBERON:0001829,3.24e-12,2;UBERON:0004089,3.24e-12,2;UBERON:0000974,7.74e-10,10;UBERON:0001042,7.74e-10,10;UBERON:0009145,7.74e-10,10;UBERON:0006562,5.00e-09,11;UBERON:0009722,5.00e-09,11;UBERON:0007690,5.00e-09,11 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,9.50064336575971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.46112780877612,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,2.98805289526203,0,0.169732529954025,1.06287460050841,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,1.41095188908457,0,4.24217784782927,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51896748360424,4.15900585782248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,9.50064336575971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.46112780877612,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,2.98805289526203,0,0.169732529954025,1.06287460050841,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,1.41095188908457,0,4.24217784782927,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51896748360424,4.15900585782248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr14:37317667..37317675,+ | |||
}} | }} |
Latest revision as of 20:33, 24 July 2015
Short description: | p@chr14:37317667..37317675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:37317667..37317675, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.34e-23 | 1 |
enteroendocrine cell | 1.34e-23 | 1 |
type D enteroendocrine cell | 1.34e-23 | 1 |
somatostatin secreting cell | 1.34e-23 | 1 |
pancreatic D cell | 1.34e-23 | 1 |
progenitor cell of endocrine pancreas | 1.34e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.60e-23 | 4 |
hemolymphoid system gland | 4.60e-23 | 4 |
thymic region | 4.60e-23 | 4 |
pharyngeal gland | 4.60e-23 | 4 |
thymus primordium | 4.60e-23 | 4 |
parotid gland | 5.13e-23 | 1 |
cheek | 5.13e-23 | 1 |
parotid gland primordium | 5.13e-23 | 1 |
gland of gut | 1.91e-20 | 10 |
pharyngeal epithelium | 9.74e-16 | 6 |
hemopoietic organ | 1.23e-13 | 7 |
immune organ | 1.23e-13 | 7 |
major salivary gland | 3.24e-12 | 2 |
midface | 3.24e-12 | 2 |
neck | 7.74e-10 | 10 |
chordate pharynx | 7.74e-10 | 10 |
pharyngeal region of foregut | 7.74e-10 | 10 |
pharynx | 5.00e-09 | 11 |
entire pharyngeal arch endoderm | 5.00e-09 | 11 |
early pharyngeal endoderm | 5.00e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.34e-23 | 1 |
neuroectodermal tumor | 1.79e-20 | 10 |
neuroendocrine tumor | 8.39e-16 | 6 |
germ cell and embryonal cancer | 1.09e-09 | 22 |
germ cell cancer | 1.09e-09 | 22 |