FFCP PHASE1:Hg19::chr14:106653371..106653382,+: Difference between revisions
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|id=chr14:106653371..106653382,+
|short_description=p@chr14:106653371..106653382,+
|description=CAGE_peak_at_chr14:106653371..106653382,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:106653371..106653382,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr14:106653371..106653382,+ | |||
|id=chr14:106653371..106653382,+ | |||
|ontology_enrichment_celltype=CL:0002127!1.78e-11!1;CL:0000914!1.78e-11!1;CL:0000911!1.78e-11!1;CL:0000814!1.78e-11!1;CL:0002042!1.78e-11!1;CL:0002039!1.78e-11!1;CL:0002040!1.78e-11!1;CL:0002041!1.78e-11!1;CL:0002563!9.42e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.70e-40;1!CL:0000557;2.70e-40;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.81e-36!7;UBERON:0002370!1.01e-23!4;UBERON:0005058!1.01e-23!4;UBERON:0009113!1.01e-23!4;UBERON:0003295!1.01e-23!4;UBERON:0005562!1.01e-23!4;UBERON:0000974!1.37e-16!10;UBERON:0003351!5.00e-16!6;UBERON:0009722!6.00e-15!11;UBERON:0007690!6.00e-15!11;UBERON:0002106!2.42e-14!3;UBERON:0004854!2.42e-14!3;UBERON:0009034!2.42e-14!3;UBERON:0002095!2.42e-14!3;UBERON:0004782!2.42e-14!3;UBERON:0003281!2.42e-14!3;UBERON:0009664!2.42e-14!3;UBERON:0002296!2.42e-14!3;UBERON:0005602!2.42e-14!3;UBERON:0001179!2.42e-14!3;UBERON:0006293!2.42e-14!3;UBERON:0008814!5.07e-11!15;UBERON:0001242!9.42e-11!4;UBERON:0001262!9.42e-11!4;UBERON:0004786!9.42e-11!4;UBERON:0004808!9.42e-11!4;UBERON:0001277!9.42e-11!4;UBERON:0003408!7.76e-10!10;UBERON:0001042!7.76e-10!10;UBERON:0009145!7.76e-10!10;UBERON:0005057!1.10e-09!26;UBERON:0006562!5.48e-09!11;UBERON:0003350!8.84e-09!5;UBERON:0002368!4.58e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.56e-79;2!UBERON:0005058;1.56e-79;2!UBERON:0009113;1.56e-79;2!UBERON:0004177;1.56e-71;5!UBERON:0005057;1.56e-71;5!UBERON:0002405;4.28e-24;27!UBERON:0002390;3.05e-17;32!UBERON:0002106;1.40e-14;3!UBERON:0000077;4.53e-14;27!UBERON:0002193;7.93e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.93e-51,7;UBERON:0005057,1.93e-51,7;UBERON:0002370,1.81e-40,4;UBERON:0005058,1.81e-40,4;UBERON:0009113,1.81e-40,4;UBERON:0003295,1.81e-40,4;UBERON:0005562,1.81e-40,4;UBERON:0003351,2.08e-27,6;UBERON:0000974,6.39e-17,10;UBERON:0003408,6.39e-17,10;UBERON:0001042,6.39e-17,10;UBERON:0009145,6.39e-17,10;UBERON:0006562,1.74e-15,11;UBERON:0009722,1.74e-15,11;UBERON:0007690,1.74e-15,11;UBERON:0002106,1.40e-14,3;UBERON:0004854,1.40e-14,3;UBERON:0009034,1.40e-14,3;UBERON:0002095,1.40e-14,3;UBERON:0004782,1.40e-14,3;UBERON:0003281,1.40e-14,3;UBERON:0009664,1.40e-14,3;UBERON:0002296,1.40e-14,3;UBERON:0005602,1.40e-14,3;UBERON:0001179,1.40e-14,3;UBERON:0006293,1.40e-14,3;UBERON:0000077,3.69e-13,29;UBERON:0008814,7.10e-10,18;UBERON:0001557,2.08e-09,19;UBERON:0002405,2.04e-07,93;UBERON:0002390,4.54e-07,98;UBERON:0003061,4.54e-07,98 | |||
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|short_description=p@chr14:106653371..106653382,+ | |||
}} | }} |
Latest revision as of 18:44, 24 July 2015
Short description: | p@chr14:106653371..106653382, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106653371..106653382, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.93e-51 | 7 |
immune organ | 1.93e-51 | 7 |
thymus | 1.81e-40 | 4 |
hemolymphoid system gland | 1.81e-40 | 4 |
thymic region | 1.81e-40 | 4 |
pharyngeal gland | 1.81e-40 | 4 |
thymus primordium | 1.81e-40 | 4 |
pharyngeal epithelium | 2.08e-27 | 6 |
neck | 6.39e-17 | 10 |
gland of gut | 6.39e-17 | 10 |
chordate pharynx | 6.39e-17 | 10 |
pharyngeal region of foregut | 6.39e-17 | 10 |
pharynx | 1.74e-15 | 11 |
entire pharyngeal arch endoderm | 1.74e-15 | 11 |
early pharyngeal endoderm | 1.74e-15 | 11 |
spleen | 1.40e-14 | 3 |
gastrointestinal system mesentery | 1.40e-14 | 3 |
stomach region | 1.40e-14 | 3 |
mesentery | 1.40e-14 | 3 |
gastrointestinal system serosa | 1.40e-14 | 3 |
mesentery of stomach | 1.40e-14 | 3 |
gut mesentery | 1.40e-14 | 3 |
dorsal mesentery | 1.40e-14 | 3 |
dorsal mesogastrium | 1.40e-14 | 3 |
peritoneal cavity | 1.40e-14 | 3 |
spleen primordium | 1.40e-14 | 3 |
mixed endoderm/mesoderm-derived structure | 3.69e-13 | 29 |
pharyngeal arch system | 7.10e-10 | 18 |
upper respiratory tract | 2.08e-09 | 19 |
immune system | 2.04e-07 | 93 |
hematopoietic system | 4.54e-07 | 98 |
blood island | 4.54e-07 | 98 |