FFCP PHASE1:Hg19::chr13:99628287..99628304,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:99628287..99628304,- | |||
|description=CAGE_peak_at_chr13:99628287..99628304,- | |||
|id=chr13:99628287..99628304,- | |||
|ontology_enrichment_celltype=CL:0002139!1.03e-29!24;CL:0000115!5.19e-24!35;CL:0000071!1.51e-23!18;CL:0002546!1.51e-23!18;CL:1000413!5.78e-19!9;CL:0002078!5.34e-18!44;CL:0000213!1.03e-12!57;CL:0000215!1.03e-12!57;CL:0002544!7.29e-12!6;CL:0002618!8.16e-09!3;CL:0005020!9.85e-08!6;CL:0002138!9.85e-08!6;CL:0005022!9.85e-08!6;CL:0002543!1.37e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.24e-12;7!CL:0000586;2.24e-12;7!CL:0002253;2.35e-11;2!CL:0002545;3.52e-11;2!CL:0002139;5.04e-08;24!CL:0000115;5.83e-08;36!CL:0002144;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.89e-12,7;CL:0000586,1.89e-12,7;CL:0002253,2.47e-11,2;CL:0002545,4.09e-11,2;CL:0000115,4.43e-09,36;CL:0002139,5.49e-08,24;CL:0002144,6.78e-08,3;CL:0002078,2.52e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.51e-23!18;UBERON:0004638!1.51e-23!18;UBERON:0004852!1.51e-23!18;UBERON:0003915!5.78e-19!9;UBERON:0004700!5.78e-19!9;UBERON:0001917!5.78e-19!9;UBERON:0000487!1.21e-18!22;UBERON:0006914!5.33e-16!25;UBERON:0007023!9.62e-13!115;UBERON:0000055!6.99e-11!69;UBERON:0004111!2.73e-10!241;UBERON:0000477!3.24e-10!286;UBERON:0000025!4.79e-10!194;UBERON:0002049!7.32e-09!79;UBERON:0007798!7.32e-09!79;UBERON:0001981!6.83e-08!60;UBERON:0007500!6.83e-08!60;UBERON:0004537!6.83e-08!60;UBERON:0006965!6.83e-08!60;UBERON:0004872!7.54e-08!84;UBERON:0001009!8.10e-07!113;UBERON:0000483!9.01e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.98e-41;2!UBERON:0005058;5.98e-41;2!UBERON:0009113;5.98e-41;2!UBERON:0004177;4.64e-17;5!UBERON:0005057;4.64e-17;5!UBERON:0005800;3.52e-11;2!UBERON:0001515;3.52e-11;2!UBERON:0010523;7.02e-08;3!UBERON:0001915;7.02e-08;3!UBERON:0001982;7.02e-08;3!UBERON:0002405;2.74e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.68e-21,4;UBERON:0005058,4.68e-21,4;UBERON:0009113,4.68e-21,4;UBERON:0003295,4.68e-21,4;UBERON:0005562,4.68e-21,4;UBERON:0003351,2.18e-14,6;UBERON:0004177,1.78e-12,7;UBERON:0005057,1.78e-12,7;UBERON:0005800,4.09e-11,2;UBERON:0001515,4.09e-11,2;UBERON:0000974,5.15e-09,10;UBERON:0003408,5.15e-09,10;UBERON:0001042,5.15e-09,10;UBERON:0009145,5.15e-09,10;UBERON:0006562,2.82e-08,11;UBERON:0009722,2.82e-08,11;UBERON:0007690,2.82e-08,11;UBERON:0010523,6.78e-08,3;UBERON:0001915,6.78e-08,3;UBERON:0001982,6.78e-08,3 | |||
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| ||
|short_description=p@chr13:99628287..99628304,- | |||
}} | }} |
Latest revision as of 17:41, 24 July 2015
Short description: | p@chr13:99628287..99628304, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99628287..99628304, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.89e-12 | 7 |
germ cell | 1.89e-12 | 7 |
epithelial cell of large intestine | 2.47e-11 | 2 |
thoracic aorta endothelial cell | 4.09e-11 | 2 |
endothelial cell | 4.43e-09 | 36 |
endothelial cell of vascular tree | 5.49e-08 | 24 |
capillary endothelial cell | 6.78e-08 | 3 |
meso-epithelial cell | 2.52e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.68e-21 | 4 |
hemolymphoid system gland | 4.68e-21 | 4 |
thymic region | 4.68e-21 | 4 |
pharyngeal gland | 4.68e-21 | 4 |
thymus primordium | 4.68e-21 | 4 |
pharyngeal epithelium | 2.18e-14 | 6 |
hemopoietic organ | 1.78e-12 | 7 |
immune organ | 1.78e-12 | 7 |
segment of aorta | 4.09e-11 | 2 |
thoracic aorta | 4.09e-11 | 2 |
neck | 5.15e-09 | 10 |
gland of gut | 5.15e-09 | 10 |
chordate pharynx | 5.15e-09 | 10 |
pharyngeal region of foregut | 5.15e-09 | 10 |
pharynx | 2.82e-08 | 11 |
entire pharyngeal arch endoderm | 2.82e-08 | 11 |
early pharyngeal endoderm | 2.82e-08 | 11 |
microcirculatory vessel | 6.78e-08 | 3 |
endothelium of capillary | 6.78e-08 | 3 |
capillary | 6.78e-08 | 3 |