FFCP PHASE1:Hg19::chr13:51101468..51101499,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_ENST00000428276_5end | |association_with_transcript=85bp_to_ENST00000428276_5end | ||
|cluster_id=chr13:51101468..51101499,- | |||
|coexpression_cluster_id=C72 | |coexpression_cluster_id=C72 | ||
|description=CAGE_peak_1_at_ENST00000428276_5end | |description=CAGE_peak_1_at_ENST00000428276_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002590!1.96e-07!3 | |ontology_enrichment_celltype=CL:0002590!1.96e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002564;5.96e-34;3 | |ontology_enrichment_celltype_v019=CL:0002564;5.96e-34;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.96e-34,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.98e-08!86;UBERON:0001017!1.46e-07!82;UBERON:0000073!3.33e-07!94;UBERON:0001016!3.33e-07!94;UBERON:0001896!9.34e-07!3;UBERON:0005290!9.34e-07!3;UBERON:0010096!9.34e-07!3;UBERON:0000955!9.71e-07!69;UBERON:0006238!9.71e-07!69 | |ontology_enrichment_uberon=UBERON:0005743!2.98e-08!86;UBERON:0001017!1.46e-07!82;UBERON:0000073!3.33e-07!94;UBERON:0001016!3.33e-07!94;UBERON:0001896!9.34e-07!3;UBERON:0005290!9.34e-07!3;UBERON:0010096!9.34e-07!3;UBERON:0000955!9.71e-07!69;UBERON:0006238!9.71e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002242;5.96e-34;3!UBERON:0011135;5.15e-21;5!UBERON:0002216;5.15e-21;5!UBERON:0011134;5.15e-21;5!UBERON:0002209;5.15e-21;5!UBERON:0002213;5.15e-21;5!UBERON:0007844;5.15e-21;5!UBERON:0011138;5.15e-21;5!UBERON:0001130;5.15e-21;5!UBERON:0001066;5.15e-21;5!UBERON:0001468;5.15e-21;5!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0001134;1.45e-07;16!UBERON:0002036;1.45e-07;16!UBERON:0000075;1.54e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0002242;5.96e-34;3!UBERON:0011135;5.15e-21;5!UBERON:0002216;5.15e-21;5!UBERON:0011134;5.15e-21;5!UBERON:0002209;5.15e-21;5!UBERON:0002213;5.15e-21;5!UBERON:0007844;5.15e-21;5!UBERON:0011138;5.15e-21;5!UBERON:0001130;5.15e-21;5!UBERON:0001066;5.15e-21;5!UBERON:0001468;5.15e-21;5!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0001134;1.45e-07;16!UBERON:0002036;1.45e-07;16!UBERON:0000075;1.54e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,5.96e-34,3;UBERON:0003068,5.96e-34,3;UBERON:0002328,5.96e-34,3;UBERON:0004880,5.96e-34,3;UBERON:0011135,5.15e-21,5;UBERON:0002216,5.15e-21,5;UBERON:0011134,5.15e-21,5;UBERON:0002209,5.15e-21,5;UBERON:0002213,5.15e-21,5;UBERON:0005856,5.15e-21,5;UBERON:0005866,5.15e-21,5;UBERON:0005863,5.15e-21,5;UBERON:0007844,5.15e-21,5;UBERON:0011138,5.15e-21,5;UBERON:0001130,5.15e-21,5;UBERON:0001066,5.15e-21,5;UBERON:0001468,5.15e-21,5;UBERON:0004905,1.07e-13,8;UBERON:0000982,1.07e-13,8;UBERON:0004770,1.07e-13,8;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16 | |||
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| ||
|short_description=p1@ENST00000428276 | |short_description=p1@ENST00000428276 | ||
}} | }} |
Latest revision as of 16:42, 24 July 2015
Short description: | p1@ENST00000428276 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000428276_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 85bp_to_ENST00000428276_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.96e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 5.96e-34 | 3 |
axial mesoderm | 5.96e-34 | 3 |
notochord | 5.96e-34 | 3 |
chordamesoderm | 5.96e-34 | 3 |
intervertebral cartilage | 5.15e-21 | 5 |
symphysis | 5.15e-21 | 5 |
nonsynovial joint | 5.15e-21 | 5 |
fibrous joint | 5.15e-21 | 5 |
cartilaginous joint | 5.15e-21 | 5 |
developing mesenchymal condensation | 5.15e-21 | 5 |
pre-cartilage condensation | 5.15e-21 | 5 |
cartilaginous condensation | 5.15e-21 | 5 |
cartilage element | 5.15e-21 | 5 |
post-cranial axial skeletal system | 5.15e-21 | 5 |
vertebral column | 5.15e-21 | 5 |
intervertebral disk | 5.15e-21 | 5 |
intervertebral joint | 5.15e-21 | 5 |
articulation | 1.07e-13 | 8 |
skeletal joint | 1.07e-13 | 8 |
articular system | 1.07e-13 | 8 |
axial skeletal system | 2.00e-08 | 14 |
subdivision of skeletal system | 1.54e-07 | 16 |