FFCP PHASE1:Hg19::chr13:36046521..36046554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:36046521..36046554,+ | |||
|coexpression_cluster_id=C699 | |coexpression_cluster_id=C699 | ||
|description=CAGE_peak_at_chr13:36046521..36046554,+ | |description=CAGE_peak_at_chr13:36046521..36046554,+ | ||
|id=chr13:36046521..36046554,+ | |id=chr13:36046521..36046554,+ | ||
|ontology_enrichment_celltype=CL:0000064!7.77e-08!3;CL:0005012!7.77e-08!3;CL:0000067!7.77e-08!3;CL:0002304!7.77e-08!3;CL:0000075!2.71e-07!27;CL:0000710!4.98e-07!20;CL:0002580!5.16e-07!3 | |ontology_enrichment_celltype=CL:0000064!7.77e-08!3;CL:0005012!7.77e-08!3;CL:0000067!7.77e-08!3;CL:0002304!7.77e-08!3;CL:0000075!2.71e-07!27;CL:0000710!4.98e-07!20;CL:0002580!5.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.29e-20;5!CL:0000064;3.58e-15;3!CL:0000067;3.58e-15;3!CL:0005012;3.58e-15;3!CL:0002304;3.58e-15;3!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0002321;1.28e-11;15!CL:0000075;1.18e-09;27!CL:0000710;1.15e-08;20!CL:0000197;6.83e-08;6!CL:0000098;6.83e-08;6!CL:0002167;6.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.00e-15,3;CL:0000067,3.00e-15,3;CL:0005012,3.00e-15,3;CL:0002304,3.00e-15,3;CL:0000228,8.64e-12,1;CL:0002372,8.64e-12,1;CL:0000133,3.40e-10,59;CL:0000075,1.17e-09,27;CL:0000710,1.29e-08,20;CL:0000221,3.08e-08,72;CL:0000197,9.01e-08,6;CL:0000098,9.01e-08,6;CL:0002167,9.01e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.01e-15;3!UBERON:0003099;8.62e-12;1!UBERON:0003852;8.62e-12;1!CL:0000221;2.26e-07;72 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.03e-16;6!DOID:171;2.96e-10;10!DOID:3095;5.59e-08;22!DOID:2994;5.59e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.06e-16,6;DOID:171,3.01e-10,10;DOID:3095,4.97e-08,22;DOID:2994,4.97e-08,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;6.29e-20;5!UBERON:0002410;6.29e-20;5!UBERON:0001778;3.58e-15;3!UBERON:0001775;3.58e-15;3!UBERON:0001456;1.93e-12;21!UBERON:0005705;8.62e-12;1!UBERON:0008193;8.62e-12;1!UBERON:0010912;8.62e-12;1!UBERON:0002514;8.62e-12;1!UBERON:0003457;8.62e-12;1!UBERON:0008907;8.62e-12;1!UBERON:0008001;8.62e-12;1!UBERON:0007213;8.62e-12;1!UBERON:0009891;8.62e-12;1!UBERON:0007914;8.62e-12;1!UBERON:0007375;8.62e-12;1!UBERON:0003323;8.62e-12;1!UBERON:0010258;8.62e-12;1!UBERON:0005253;8.62e-12;1!UBERON:0007842;8.62e-12;1!UBERON:0002397;8.62e-12;1!UBERON:0003113;8.62e-12;1!UBERON:0003277;8.62e-12;1!UBERON:0001709;8.62e-12;1!UBERON:0002244;8.62e-12;1!UBERON:0005620;8.62e-12;1!UBERON:0010364;8.62e-12;1!UBERON:0004288;8.62e-12;1!UBERON:0000488;1.29e-11;4!UBERON:0000010;2.46e-11;8!UBERON:0007625;3.11e-09;11!UBERON:0000019;4.13e-09;19!UBERON:0000047;4.13e-09;19!UBERON:0004088;4.13e-09;19!UBERON:0010230;4.13e-09;19!UBERON:0000970;1.15e-08;20!UBERON:0002104;2.93e-08;21!UBERON:0002203;4.90e-08;6!UBERON:0001768;4.90e-08;6!UBERON:0002200;4.90e-08;6!UBERON:0002037;6.83e-08;6!UBERON:0000020;1.48e-07;23!UBERON:0001801;2.32e-07;14!UBERON:0001032;3.02e-07;24!UBERON:0004456;3.02e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.52e-20,5;UBERON:0002410,6.52e-20,5;UBERON:0001778,3.00e-15,3;UBERON:0001775,3.00e-15,3;UBERON:0005705,5.62e-12,1;UBERON:0008193,5.62e-12,1;UBERON:0010912,5.62e-12,1;UBERON:0002514,5.62e-12,1;UBERON:0003457,5.62e-12,1;UBERON:0008907,5.62e-12,1;UBERON:0008001,5.62e-12,1;UBERON:0007213,5.62e-12,1;UBERON:0009891,5.62e-12,1;UBERON:0007914,5.62e-12,1;UBERON:0009292,5.62e-12,1;UBERON:0003099,5.62e-12,1;UBERON:0007375,5.62e-12,1;UBERON:0003323,5.62e-12,1;UBERON:0010258,5.62e-12,1;UBERON:0007842,5.62e-12,1;UBERON:0009494,5.62e-12,1;UBERON:0010042,5.62e-12,1;UBERON:0010045,5.62e-12,1;UBERON:0010259,5.62e-12,1;UBERON:0010359,5.62e-12,1;UBERON:0009526,5.62e-12,1;UBERON:0002397,5.62e-12,1;UBERON:0003113,5.62e-12,1;UBERON:0003277,5.62e-12,1;UBERON:0001709,5.62e-12,1;UBERON:0004066,5.62e-12,1;UBERON:0002244,5.62e-12,1;UBERON:0005620,5.62e-12,1;UBERON:0004362,5.62e-12,1;UBERON:0010364,5.62e-12,1;UBERON:0010046,5.62e-12,1;UBERON:0005868,5.62e-12,1;UBERON:0007238,5.62e-12,1;UBERON:0004288,5.62e-12,1;UBERON:0004068,5.62e-12,1;UBERON:0010334,5.62e-12,1;UBERON:0003852,5.62e-12,1;UBERON:0010253,5.62e-12,1;UBERON:0001456,5.62e-12,22;UBERON:0000488,1.13e-11,4;UBERON:0000010,2.51e-11,8;UBERON:0007625,2.45e-09,11;UBERON:0000019,1.01e-08,20;UBERON:0000047,1.01e-08,20;UBERON:0010312,1.01e-08,20;UBERON:0004088,1.01e-08,20;UBERON:0010230,1.01e-08,20;UBERON:0003072,1.01e-08,20;UBERON:0004128,1.01e-08,20;UBERON:0003071,1.01e-08,20;UBERON:0000970,2.59e-08,21;UBERON:0002104,2.59e-08,21;UBERON:0002203,4.50e-08,6;UBERON:0001768,4.50e-08,6;UBERON:0002200,4.50e-08,6;UBERON:0002037,5.36e-08,6;UBERON:0006215,5.36e-08,6;UBERON:0001801,1.93e-07,14;UBERON:0000020,2.71e-07,24;UBERON:0001032,2.71e-07,24;UBERON:0004456,2.71e-07,24;UBERON:0003075,3.33e-07,82;UBERON:0007284,3.33e-07,82;UBERON:0004121,5.52e-07,171;UBERON:0000924,5.52e-07,171;UBERON:0006601,5.52e-07,171;UBERON:0002346,7.89e-07,86 | |||
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|short_description=p@chr13:36046521..36046554,+ | |short_description=p@chr13:36046521..36046554,+ | ||
}} | }} |
Latest revision as of 15:45, 24 July 2015
Short description: | p@chr13:36046521..36046554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:36046521..36046554, + |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.00e-15 | 3 |
ciliated epithelial cell | 3.00e-15 | 3 |
multi-ciliated epithelial cell | 3.00e-15 | 3 |
non-pigmented ciliary epithelial cell | 3.00e-15 | 3 |
multinucleate cell | 8.64e-12 | 1 |
myotube | 8.64e-12 | 1 |
neurectodermal cell | 3.40e-10 | 59 |
columnar/cuboidal epithelial cell | 1.17e-09 | 27 |
neurecto-epithelial cell | 1.29e-08 | 20 |
ectodermal cell | 3.08e-08 | 72 |
receptor cell | 9.01e-08 | 6 |
sensory epithelial cell | 9.01e-08 | 6 |
olfactory epithelial cell | 9.01e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.06e-16 | 6 |
neuroectodermal tumor | 3.01e-10 | 10 |
germ cell and embryonal cancer | 4.97e-08 | 22 |
germ cell cancer | 4.97e-08 | 22 |