FFCP PHASE1:Hg19::chr13:114542805..114542816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114542805..114542816,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr13:114542805..114542816,- | |description=CAGE_peak_at_chr13:114542805..114542816,- | ||
|id=chr13:114542805..114542816,- | |id=chr13:114542805..114542816,- | ||
|ontology_enrichment_celltype=CL:0000349!1.73e-07!3;CL:0002577!1.73e-07!3;CL:0002537!2.81e-07!5 | |ontology_enrichment_celltype=CL:0000349!1.73e-07!3;CL:0002577!1.73e-07!3;CL:0002537!2.81e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.45e-42;19!CL:0002536;1.17e-33;2!CL:0002537;1.34e-30;5!CL:0002577;4.11e-23;3!CL:0002615;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.55e-42,19;CL:0002536,1.93e-33,2;CL:0002537,1.56e-30,5;CL:0002577,4.12e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.48e-18;1!UBERON:0007297;1.51e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.86e-07;3!DOID:127;8.86e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.28e-07,3;DOID:127,7.28e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.52e-16!14;UBERON:0000158!2.52e-16!14;UBERON:0000305!5.40e-11!7;UBERON:0000478!4.90e-10!24;UBERON:0004871!1.74e-09!8;UBERON:0001987!1.23e-08!4;UBERON:0004340!1.23e-08!4;UBERON:0004119!1.29e-07!169;UBERON:0000925!1.29e-07!169;UBERON:0006595!1.29e-07!169;UBERON:0003124!3.38e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!2.52e-16!14;UBERON:0000158!2.52e-16!14;UBERON:0000305!5.40e-11!7;UBERON:0000478!4.90e-10!24;UBERON:0004871!1.74e-09!8;UBERON:0001987!1.23e-08!4;UBERON:0004340!1.23e-08!4;UBERON:0004119!1.29e-07!169;UBERON:0000925!1.29e-07!169;UBERON:0006595!1.29e-07!169;UBERON:0003124!3.38e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;7.51e-59;7!UBERON:0005631;2.67e-41;10!UBERON:0000158;2.67e-41;10!UBERON:0000478;2.29e-33;24!UBERON:0000998;9.48e-18;1!UBERON:0006868;9.48e-18;1!UBERON:0001987;1.33e-17;4!UBERON:0006947;8.86e-07;3!UBERON:0004054;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.29e-58,7;UBERON:0005631,3.98e-57,14;UBERON:0000158,3.98e-57,14;UBERON:0004871,2.46e-51,8;UBERON:0000478,2.85e-33,24;UBERON:0000998,7.37e-18,1;UBERON:0006868,7.37e-18,1;UBERON:0001987,1.33e-17,4;UBERON:0004340,1.33e-17,4;UBERON:0004923,1.91e-15,66;UBERON:0004175,5.78e-11,25;UBERON:0003124,1.77e-10,7;UBERON:0000995,9.51e-08,21;UBERON:0005795,2.02e-07,22;UBERON:0003975,2.02e-07,22;UBERON:0006947,8.15e-07,3;UBERON:0004054,8.15e-07,3 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,1.09220686065086,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0.909382714338778,3.32870879020994,1.5119514666484,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.19372242368845,2.67268212749375,5.52889263778618,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,1.70690172428249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,1.72844298240254,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,1.69354820076372,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,1.09220686065086,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0.909382714338778,3.32870879020994,1.5119514666484,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.19372242368845,2.67268212749375,5.52889263778618,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,1.70690172428249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,1.72844298240254,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,1.69354820076372,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:114542805..114542816,- | |short_description=p@chr13:114542805..114542816,- | ||
}} | }} |
Latest revision as of 14:50, 24 July 2015
Short description: | p@chr13:114542805..114542816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114542805..114542816, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.55e-42 | 19 |
amniotic epithelial cell | 1.93e-33 | 2 |
amnion mesenchymal stem cell | 1.56e-30 | 5 |
placental epithelial cell | 4.12e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.29e-58 | 7 |
extraembryonic membrane | 3.98e-57 | 14 |
membranous layer | 3.98e-57 | 14 |
somatic layer of lateral plate mesoderm | 2.46e-51 | 8 |
extraembryonic structure | 2.85e-33 | 24 |
seminal vesicle | 7.37e-18 | 1 |
seminal fluid secreting gland | 7.37e-18 | 1 |
placenta | 1.33e-17 | 4 |
allantois | 1.33e-17 | 4 |
organ component layer | 1.91e-15 | 66 |
internal genitalia | 5.78e-11 | 25 |
chorion | 1.77e-10 | 7 |
uterus | 9.51e-08 | 21 |
embryonic uterus | 2.02e-07 | 22 |
internal female genitalia | 2.02e-07 | 22 |
male genital duct | 8.15e-07 | 3 |
internal male genitalia | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.28e-07 | 3 |
leiomyoma | 7.28e-07 | 3 |