FFCP PHASE1:Hg19::chr12:96525251..96525258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96525251..96525258,+ | |||
|description=CAGE_peak_at_chr12:96525251..96525258,+ | |description=CAGE_peak_at_chr12:96525251..96525258,+ | ||
|id=chr12:96525251..96525258,+ | |id=chr12:96525251..96525258,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.15e-09!4;CL:0000167!1.25e-09!1;CL:0000164!1.25e-09!1;CL:0000502!1.25e-09!1;CL:0000172!1.25e-09!1;CL:0000173!1.25e-09!1;CL:0002351!1.25e-09!1;CL:0000946!2.46e-09!1;CL:0000786!2.46e-09!1;CL:0000980!2.46e-09!1 | |ontology_enrichment_celltype=CL:0002563!1.15e-09!4;CL:0000167!1.25e-09!1;CL:0000164!1.25e-09!1;CL:0000502!1.25e-09!1;CL:0000172!1.25e-09!1;CL:0000173!1.25e-09!1;CL:0002351!1.25e-09!1;CL:0000946!2.46e-09!1;CL:0000786!2.46e-09!1;CL:0000980!2.46e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002563;9.87e-34;4!CL:0002253;9.07e-18;2!CL:0002231;2.59e-12;3!CL:0002076;3.29e-08;42!CL:0002251;1.38e-07;20!CL:0002544;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.07e-34,4;CL:0002253,6.48e-18,2;CL:0002231,2.89e-12,3;CL:0002076,8.13e-08,42;CL:0002251,1.29e-07,20;CL:0002544,8.02e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!1.25e-09!1;DOID:1749!1.27e-09!14;DOID:5409!2.08e-09!4;DOID:305!1.14e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;9.07e-18;2!DOID:3119;1.99e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.27e-17,2;DOID:3119,1.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.09e-11!12;UBERON:0004913!5.79e-10!1;UBERON:0003703!5.79e-10!1;UBERON:0001174!5.79e-10!1;UBERON:0004914!5.79e-10!1;UBERON:0007029!6.88e-10!1;UBERON:0001242!1.15e-09!4;UBERON:0001262!1.15e-09!4;UBERON:0004786!1.15e-09!4;UBERON:0004808!1.15e-09!4;UBERON:0001277!1.15e-09!4;UBERON:0003343!4.98e-09!4;UBERON:0004785!4.98e-09!4;UBERON:0003350!6.74e-08!5;UBERON:0003729!2.16e-07!5 | |ontology_enrichment_uberon=UBERON:0000344!2.09e-11!12;UBERON:0004913!5.79e-10!1;UBERON:0003703!5.79e-10!1;UBERON:0001174!5.79e-10!1;UBERON:0004914!5.79e-10!1;UBERON:0007029!6.88e-10!1;UBERON:0001242!1.15e-09!4;UBERON:0001262!1.15e-09!4;UBERON:0004786!1.15e-09!4;UBERON:0004808!1.15e-09!4;UBERON:0001277!1.15e-09!4;UBERON:0003343!4.98e-09!4;UBERON:0004785!4.98e-09!4;UBERON:0003350!6.74e-08!5;UBERON:0003729!2.16e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.05e-34;1!UBERON:0003703;5.05e-34;1!UBERON:0001174;5.05e-34;1!UBERON:0004914;5.05e-34;1!UBERON:0001242;9.87e-34;4!UBERON:0001262;9.87e-34;4!UBERON:0004786;9.87e-34;4!UBERON:0004808;9.87e-34;4!UBERON:0001277;9.87e-34;4!UBERON:0000485;8.62e-20;7!UBERON:0003929;8.62e-20;7!UBERON:0003350;1.85e-17;8!UBERON:0000160;3.30e-17;17!UBERON:0005409;1.20e-13;22!UBERON:0002114;2.59e-12;2!UBERON:0004921;4.08e-10;33!UBERON:0000490;1.38e-09;33!UBERON:0001052;1.44e-09;4!UBERON:0002394;1.44e-09;4!UBERON:0003928;1.44e-09;4!UBERON:0002108;6.55e-08;4!UBERON:0004907;6.55e-08;5!UBERON:0000344;1.38e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,7.07e-34,4;UBERON:0001262,7.07e-34,4;UBERON:0004786,7.07e-34,4;UBERON:0004808,7.07e-34,4;UBERON:0001277,7.07e-34,4;UBERON:0004913,9.85e-34,1;UBERON:0003703,9.85e-34,1;UBERON:0001174,9.85e-34,1;UBERON:0004914,9.85e-34,1;UBERON:0003350,1.57e-17,8;UBERON:0000160,3.30e-17,17;UBERON:0000485,1.05e-15,9;UBERON:0002114,3.24e-12,2;UBERON:0005409,3.64e-12,25;UBERON:0003929,2.52e-10,54;UBERON:0001052,1.22e-09,4;UBERON:0004907,5.73e-08,5;UBERON:0001046,5.94e-08,19;UBERON:0002108,7.49e-08,4;UBERON:0000344,1.29e-07,20;UBERON:0005911,5.72e-07,82;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
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|short_description=p@chr12:96525251..96525258,+ | |short_description=p@chr12:96525251..96525258,+ | ||
}} | }} |
Latest revision as of 13:52, 24 July 2015
Short description: | p@chr12:96525251..96525258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96525251..96525258, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.07e-34 | 4 |
epithelial cell of large intestine | 6.48e-18 | 2 |
epithelial cell of prostate | 2.89e-12 | 3 |
endo-epithelial cell | 8.13e-08 | 42 |
epithelial cell of alimentary canal | 1.29e-07 | 20 |
aortic endothelial cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 7.07e-34 | 4 |
wall of intestine | 7.07e-34 | 4 |
gastrointestinal system mucosa | 7.07e-34 | 4 |
gastrointestinal system epithelium | 7.07e-34 | 4 |
intestinal epithelium | 7.07e-34 | 4 |
hepatopancreatic ampulla | 9.85e-34 | 1 |
extrahepatic bile duct | 9.85e-34 | 1 |
common bile duct | 9.85e-34 | 1 |
duodenal papilla | 9.85e-34 | 1 |
epithelium of mucosa | 1.57e-17 | 8 |
intestine | 3.30e-17 | 17 |
simple columnar epithelium | 1.05e-15 | 9 |
duodenum | 3.24e-12 | 2 |
gastrointestinal system | 3.64e-12 | 25 |
gut epithelium | 2.52e-10 | 54 |
rectum | 1.22e-09 | 4 |
lower digestive tract | 5.73e-08 | 5 |
hindgut | 5.94e-08 | 19 |
small intestine | 7.49e-08 | 4 |
mucosa | 1.29e-07 | 20 |
endo-epithelium | 5.72e-07 | 82 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.27e-17 | 2 |
gastrointestinal system cancer | 1.99e-10 | 14 |