FFCP PHASE1:Hg19::chr12:90313394..90313420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000549551_5end | |association_with_transcript=-48bp_to_ENST00000549551_5end | ||
|cluster_id=chr12:90313394..90313420,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_1_at_ENST00000549551_5end | |description=CAGE_peak_1_at_ENST00000549551_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.31e-07;4 | |ontology_enrichment_celltype_v019=CL:0002327;1.31e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.31e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.16e-26;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.16e-26;1 | ||
|ontology_enrichment_disease=DOID:5093!5.82e-16!4;DOID:1612!5.82e-16!4 | |ontology_enrichment_disease=DOID:5093!5.82e-16!4;DOID:1612!5.82e-16!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;4.58e-56;4!DOID:1612;4.58e-56;4!DOID:299;1.35e-09;25 | |ontology_enrichment_disease_v019=DOID:5093;4.58e-56;4!DOID:1612;4.58e-56;4!DOID:299;1.35e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,4.58e-56,4;DOID:1612,4.58e-56,4;DOID:299,1.35e-09,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.53e-23;10!UBERON:0001443;5.70e-21;11!UBERON:0002114;1.10e-09;2!UBERON:0001911;1.31e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000310;5.53e-23;10!UBERON:0001443;5.70e-21;11!UBERON:0002114;1.10e-09;2!UBERON:0001911;1.31e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.53e-23,10;UBERON:0001443,5.70e-21,11;UBERON:0002114,1.10e-09,2;UBERON:0001911,1.31e-07,4;UBERON:0005333,1.31e-07,4;UBERON:0008425,1.31e-07,4;UBERON:0005311,1.31e-07,4 | |||
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| ||
|short_description=p1@ENST00000549551 | |short_description=p1@ENST00000549551 | ||
}} | }} |
Latest revision as of 13:24, 24 July 2015
Short description: | p1@ENST00000549551 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000549551_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -48bp_to_ENST00000549551_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 5.53e-23 | 10 |
chest | 5.70e-21 | 11 |
duodenum | 1.10e-09 | 2 |
mammary gland | 1.31e-07 | 4 |
mammary bud | 1.31e-07 | 4 |
mammary ridge | 1.31e-07 | 4 |
mammary placode | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.58e-56 | 4 |
breast cancer | 4.58e-56 | 4 |
adenocarcinoma | 1.35e-09 | 25 |