FFCP PHASE1:Hg19::chr12:70329888..70329889,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:70329888..70329889,+ | |||
|description=CAGE_peak_at_chr12:70329888..70329889,+ | |description=CAGE_peak_at_chr12:70329888..70329889,+ | ||
|id=chr12:70329888..70329889,+ | |id=chr12:70329888..70329889,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;6.32e-10;1!CL:0002625;6.32e-10;1!CL:0000216;6.32e-10;1 | |ontology_enrichment_celltype_v019=CL:0000511;6.32e-10;1!CL:0002625;6.32e-10;1!CL:0000216;6.32e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.44e-10,1;CL:0002625,4.44e-10,1;CL:0000216,4.44e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.93e-13;3!UBERON:0005425;6.32e-10;1 | |ontology_enrichment_development_v019=UBERON:0006215;9.93e-13;3!UBERON:0005425;6.32e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.77e-15!115;UBERON:0001049!2.60e-13!57;UBERON:0005068!2.60e-13!57;UBERON:0006241!2.60e-13!57;UBERON:0007135!2.60e-13!57;UBERON:0000924!7.67e-13!173;UBERON:0006601!7.67e-13!173;UBERON:0002346!9.65e-13!90;UBERON:0004121!2.41e-12!169;UBERON:0003075!2.87e-12!86;UBERON:0007284!2.87e-12!86;UBERON:0000073!3.89e-12!94;UBERON:0001016!3.89e-12!94;UBERON:0001017!3.95e-11!82;UBERON:0005743!7.77e-11!86;UBERON:0002616!2.02e-10!59;UBERON:0002780!1.24e-08!41;UBERON:0001890!1.24e-08!41;UBERON:0006240!1.24e-08!41;UBERON:0003080!2.82e-08!42;UBERON:0000955!2.94e-08!69;UBERON:0006238!2.94e-08!69;UBERON:0002020!1.74e-07!34;UBERON:0003528!1.74e-07!34;UBERON:0001893!3.68e-07!34;UBERON:0002619!4.92e-07!22;UBERON:0001869!7.27e-07!32;UBERON:0001871!7.32e-07!7;UBERON:0003076!8.01e-07!15;UBERON:0003057!8.01e-07!15;UBERON:0002791!8.59e-07!33;UBERON:0001950!8.86e-07!20;UBERON:0003056!9.69e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.77e-15!115;UBERON:0001049!2.60e-13!57;UBERON:0005068!2.60e-13!57;UBERON:0006241!2.60e-13!57;UBERON:0007135!2.60e-13!57;UBERON:0000924!7.67e-13!173;UBERON:0006601!7.67e-13!173;UBERON:0002346!9.65e-13!90;UBERON:0004121!2.41e-12!169;UBERON:0003075!2.87e-12!86;UBERON:0007284!2.87e-12!86;UBERON:0000073!3.89e-12!94;UBERON:0001016!3.89e-12!94;UBERON:0001017!3.95e-11!82;UBERON:0005743!7.77e-11!86;UBERON:0002616!2.02e-10!59;UBERON:0002780!1.24e-08!41;UBERON:0001890!1.24e-08!41;UBERON:0006240!1.24e-08!41;UBERON:0003080!2.82e-08!42;UBERON:0000955!2.94e-08!69;UBERON:0006238!2.94e-08!69;UBERON:0002020!1.74e-07!34;UBERON:0003528!1.74e-07!34;UBERON:0001893!3.68e-07!34;UBERON:0002619!4.92e-07!22;UBERON:0001869!7.27e-07!32;UBERON:0001871!7.32e-07!7;UBERON:0003076!8.01e-07!15;UBERON:0003057!8.01e-07!15;UBERON:0002791!8.59e-07!33;UBERON:0001950!8.86e-07!20;UBERON:0003056!9.69e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.33e-28;4!UBERON:0002114;1.22e-12;2!UBERON:0000160;3.18e-12;17!UBERON:0004732;6.38e-11;13!UBERON:0007029;6.32e-10;1!UBERON:0001136;6.32e-10;1!UBERON:0000941;6.32e-10;1!UBERON:0001343;6.32e-10;1!UBERON:0004913;6.32e-10;1!UBERON:0001785;6.32e-10;1!UBERON:0002464;6.32e-10;1!UBERON:0004904;6.32e-10;1!UBERON:0003703;6.32e-10;1!UBERON:0001021;6.32e-10;1!UBERON:0004910;6.32e-10;1!UBERON:0004813;6.32e-10;1!UBERON:0001174;6.32e-10;1!UBERON:0004914;6.32e-10;1!UBERON:0005409;1.57e-09;22!UBERON:0004921;3.77e-08;33!UBERON:0004733;4.26e-07;12!UBERON:0002028;4.26e-07;12!UBERON:0002037;8.63e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.33e-28;4!UBERON:0002114;1.22e-12;2!UBERON:0000160;3.18e-12;17!UBERON:0004732;6.38e-11;13!UBERON:0007029;6.32e-10;1!UBERON:0001136;6.32e-10;1!UBERON:0000941;6.32e-10;1!UBERON:0001343;6.32e-10;1!UBERON:0004913;6.32e-10;1!UBERON:0001785;6.32e-10;1!UBERON:0002464;6.32e-10;1!UBERON:0004904;6.32e-10;1!UBERON:0003703;6.32e-10;1!UBERON:0001021;6.32e-10;1!UBERON:0004910;6.32e-10;1!UBERON:0004813;6.32e-10;1!UBERON:0001174;6.32e-10;1!UBERON:0004914;6.32e-10;1!UBERON:0005409;1.57e-09;22!UBERON:0004921;3.77e-08;33!UBERON:0004733;4.26e-07;12!UBERON:0002028;4.26e-07;12!UBERON:0002037;8.63e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.34e-28,4;UBERON:0002114,1.26e-12,2;UBERON:0000160,3.30e-12,17;UBERON:0004732,6.73e-11,13;UBERON:0001136,4.44e-10,1;UBERON:0001343,4.44e-10,1;UBERON:0004910,4.44e-10,1;UBERON:0005154,4.44e-10,1;UBERON:0005295,4.44e-10,1;UBERON:0004813,4.44e-10,1;UBERON:0005297,4.44e-10,1;UBERON:0005294,4.44e-10,1;UBERON:0010141,4.44e-10,1;UBERON:0005891,4.44e-10,1;UBERON:0007029,6.33e-10,1;UBERON:0000941,6.91e-10,1;UBERON:0001785,6.91e-10,1;UBERON:0002464,6.91e-10,1;UBERON:0004904,6.91e-10,1;UBERON:0001021,6.91e-10,1;UBERON:0003902,6.91e-10,1;UBERON:0005425,6.91e-10,1;UBERON:0004913,7.55e-10,1;UBERON:0003703,7.55e-10,1;UBERON:0001174,7.55e-10,1;UBERON:0004914,7.55e-10,1;UBERON:0003076,1.70e-09,15;UBERON:0003057,1.70e-09,15;UBERON:0005409,2.13e-08,25;UBERON:0004733,4.36e-07,12;UBERON:0002028,4.36e-07,12;UBERON:0007277,4.36e-07,12;UBERON:0002037,7.92e-07,6;UBERON:0006215,7.92e-07,6 | |||
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| ||
|short_description=p@chr12:70329888..70329889,+ | |short_description=p@chr12:70329888..70329889,+ | ||
}} | }} |
Latest revision as of 11:59, 24 July 2015
Short description: | p@chr12:70329888..70329889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:70329888..70329889, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.44e-10 | 1 |
seminiferous tubule epithelial cell | 4.44e-10 | 1 |
Sertoli cell | 4.44e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.34e-28 | 4 |
duodenum | 1.26e-12 | 2 |
intestine | 3.30e-12 | 17 |
segmental subdivision of nervous system | 6.73e-11 | 13 |
mesothelium | 4.44e-10 | 1 |
seminiferous tubule of testis | 4.44e-10 | 1 |
epithelium of male gonad | 4.44e-10 | 1 |
epithelial cord | 4.44e-10 | 1 |
sex cord | 4.44e-10 | 1 |
seminiferous tubule epithelium | 4.44e-10 | 1 |
testis sex cord | 4.44e-10 | 1 |
genital ridge | 4.44e-10 | 1 |
primitive sex cord of indifferent gonad | 4.44e-10 | 1 |
coelomic epithelium | 4.44e-10 | 1 |
surface | 6.33e-10 | 1 |
cranial nerve II | 6.91e-10 | 1 |
cranial nerve | 6.91e-10 | 1 |
nerve trunk | 6.91e-10 | 1 |
nerve connecting eye with brain | 6.91e-10 | 1 |
nerve | 6.91e-10 | 1 |
retinal neural layer | 6.91e-10 | 1 |
presumptive neural retina | 6.91e-10 | 1 |
hepatopancreatic ampulla | 7.55e-10 | 1 |
extrahepatic bile duct | 7.55e-10 | 1 |
common bile duct | 7.55e-10 | 1 |
duodenal papilla | 7.55e-10 | 1 |
posterior neural tube | 1.70e-09 | 15 |
chordal neural plate | 1.70e-09 | 15 |
gastrointestinal system | 2.13e-08 | 25 |
segmental subdivision of hindbrain | 4.36e-07 | 12 |
hindbrain | 4.36e-07 | 12 |
presumptive hindbrain | 4.36e-07 | 12 |
cerebellum | 7.92e-07 | 6 |
rhombic lip | 7.92e-07 | 6 |