FFCP PHASE1:Hg19::chr12:70274748..70274753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:70274748..70274753,+ | |||
|description=CAGE_peak_at_chr12:70274748..70274753,+ | |description=CAGE_peak_at_chr12:70274748..70274753,+ | ||
|id=chr12:70274748..70274753,+ | |id=chr12:70274748..70274753,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.41e-14;3!UBERON:0005425;2.79e-11;1 | |||
|ontology_enrichment_disease=DOID:0050687!6.20e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.42e-19!57;UBERON:0005068!6.42e-19!57;UBERON:0006241!6.42e-19!57;UBERON:0007135!6.42e-19!57;UBERON:0002616!1.60e-16!59;UBERON:0002780!4.40e-14!41;UBERON:0001890!4.40e-14!41;UBERON:0006240!4.40e-14!41;UBERON:0003080!1.40e-13!42;UBERON:0002020!1.48e-13!34;UBERON:0003528!1.48e-13!34;UBERON:0001893!2.38e-13!34;UBERON:0001869!7.62e-13!32;UBERON:0001017!9.42e-13!82;UBERON:0002346!1.04e-12!90;UBERON:0002791!1.54e-12!33;UBERON:0005743!1.69e-12!86;UBERON:0000955!1.96e-12!69;UBERON:0006238!1.96e-12!69;UBERON:0000073!4.63e-12!94;UBERON:0001016!4.63e-12!94;UBERON:0002619!6.42e-12!22;UBERON:0007023!8.05e-12!115;UBERON:0003075!8.70e-12!86;UBERON:0007284!8.70e-12!86;UBERON:0000956!5.03e-10!25;UBERON:0000203!5.03e-10!25;UBERON:0001950!1.07e-09!20;UBERON:0003056!6.31e-09!61;UBERON:0001871!1.02e-08!7;UBERON:0000033!2.77e-08!123;UBERON:0000924!3.12e-08!173;UBERON:0006601!3.12e-08!173;UBERON:0000153!5.34e-08!129;UBERON:0007811!5.34e-08!129;UBERON:0004121!1.49e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.69e-47;4!UBERON:0002114;5.69e-29;2!UBERON:0000160;1.02e-18;17!UBERON:0005409;1.44e-14;22!UBERON:0004732;4.15e-12;13!UBERON:0000941;2.79e-11;1!UBERON:0001785;2.79e-11;1!UBERON:0002464;2.79e-11;1!UBERON:0004904;2.79e-11;1!UBERON:0001021;2.79e-11;1!UBERON:0002038;9.96e-11;1!UBERON:0007195;9.96e-11;1!UBERON:0004913;9.96e-11;1!UBERON:0003703;9.96e-11;1!UBERON:0009661;9.96e-11;1!UBERON:0002950;9.96e-11;1!UBERON:0001891;9.96e-11;1!UBERON:0001174;9.96e-11;1!UBERON:0004914;9.96e-11;1!UBERON:0004921;1.84e-09;33!UBERON:0004733;9.86e-08;12!UBERON:0002028;9.86e-08;12!UBERON:0002037;2.30e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.25e-47,4;UBERON:0002114,4.28e-29,2;UBERON:0000160,7.96e-19,17;UBERON:0005409,6.51e-13,25;UBERON:0004732,3.81e-12,13;UBERON:0000941,2.79e-11,1;UBERON:0001785,2.79e-11,1;UBERON:0002464,2.79e-11,1;UBERON:0004904,2.79e-11,1;UBERON:0001021,2.79e-11,1;UBERON:0003902,2.79e-11,1;UBERON:0005425,2.79e-11,1;UBERON:0004913,1.33e-10,1;UBERON:0003703,1.33e-10,1;UBERON:0001174,1.33e-10,1;UBERON:0004914,1.33e-10,1;UBERON:0002038,1.46e-10,1;UBERON:0009661,1.46e-10,1;UBERON:0002950,1.46e-10,1;UBERON:0001891,1.46e-10,1;UBERON:0009616,1.46e-10,1;UBERON:0010286,1.46e-10,1;UBERON:0007195,1.77e-10,1;UBERON:0004733,9.20e-08,12;UBERON:0002028,9.20e-08,12;UBERON:0007277,9.20e-08,12;UBERON:0002037,2.02e-07,6;UBERON:0006215,2.02e-07,6;UBERON:0011216,4.76e-07,223 | |||
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| ||
|short_description=p@chr12:70274748..70274753,+ | |short_description=p@chr12:70274748..70274753,+ | ||
}} | }} |
Latest revision as of 11:59, 24 July 2015
Short description: | p@chr12:70274748..70274753, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:70274748..70274753, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.25e-47 | 4 |
duodenum | 4.28e-29 | 2 |
intestine | 7.96e-19 | 17 |
gastrointestinal system | 6.51e-13 | 25 |
segmental subdivision of nervous system | 3.81e-12 | 13 |
cranial nerve II | 2.79e-11 | 1 |
cranial nerve | 2.79e-11 | 1 |
nerve trunk | 2.79e-11 | 1 |
nerve connecting eye with brain | 2.79e-11 | 1 |
nerve | 2.79e-11 | 1 |
retinal neural layer | 2.79e-11 | 1 |
presumptive neural retina | 2.79e-11 | 1 |
hepatopancreatic ampulla | 1.33e-10 | 1 |
extrahepatic bile duct | 1.33e-10 | 1 |
common bile duct | 1.33e-10 | 1 |
duodenal papilla | 1.33e-10 | 1 |
substantia nigra | 1.46e-10 | 1 |
midbrain nucleus | 1.46e-10 | 1 |
regional part of midbrain | 1.46e-10 | 1 |
midbrain | 1.46e-10 | 1 |
presumptive midbrain | 1.46e-10 | 1 |
midbrain neural tube | 1.46e-10 | 1 |
stroma of bone marrow | 1.77e-10 | 1 |
segmental subdivision of hindbrain | 9.20e-08 | 12 |
hindbrain | 9.20e-08 | 12 |
presumptive hindbrain | 9.20e-08 | 12 |
cerebellum | 2.02e-07 | 6 |
rhombic lip | 2.02e-07 | 6 |
organ system subdivision | 4.76e-07 | 223 |