FFCP PHASE1:Hg19::chr12:6571231..6571263,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6571231..6571263,+ to FFCP PHASE1:Hg19::chr12:6571231..6571263,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6571231..6571263,+ | |||
|description=CAGE_peak_at_chr12:6571231..6571263,+ | |||
|id=chr12:6571231..6571263,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.06e-45!172;CL:0000566!9.06e-45!172;CL:0000738!1.11e-43!140;CL:0000988!1.31e-41!182;CL:0002032!2.94e-39!165;CL:0000837!2.94e-39!165;CL:0002087!9.80e-33!119;CL:0002031!1.61e-28!124;CL:0000542!8.41e-28!53;CL:0000051!8.41e-28!53;CL:0000838!7.74e-27!52;CL:0000763!2.17e-14!112;CL:0000049!2.17e-14!112;CL:0000945!9.48e-13!24;CL:0000826!9.48e-13!24;CL:0000084!1.71e-12!25;CL:0000827!1.71e-12!25;CL:0000766!4.86e-11!76;CL:0000094!7.34e-11!8;CL:0000791!1.05e-09!18;CL:0000789!1.05e-09!18;CL:0002420!1.05e-09!18;CL:0002419!1.05e-09!18;CL:0000790!1.05e-09!18;CL:0000134!1.61e-09!358;CL:0000081!6.48e-09!11;CL:0002320!7.54e-09!365;CL:0002009!1.73e-08!65;CL:0002057!3.83e-08!42;CL:0002194!2.47e-07!63;CL:0000576!2.47e-07!63;CL:0000040!2.47e-07!63;CL:0000559!2.47e-07!63;CL:0000860!3.35e-07!45;CL:0000557!4.17e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.66e-18;8!CL:0000775;2.66e-13;3!CL:0000081;4.05e-13;11!CL:0000771;1.19e-09;2!CL:0000791;4.85e-07;18!CL:0000789;4.85e-07;18!CL:0002419;4.85e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.66e-18,8;CL:0000037,3.53e-16,168;CL:0002032,8.24e-16,161;CL:0000837,8.24e-16,161;CL:0000988,5.60e-15,177;CL:0000775,2.06e-13,3;CL:0000081,4.04e-13,11;CL:0000738,4.97e-13,136;CL:0000771,1.10e-09,2;CL:0000763,1.71e-08,108;CL:0000049,1.71e-08,108;CL:0000838,2.89e-08,52;CL:0000893,3.61e-08,2;CL:0002489,3.61e-08,2;CL:0000809,3.61e-08,2;CL:0000808,3.61e-08,2;CL:0000894,3.61e-08,2;CL:0000806,3.61e-08,2;CL:0000807,3.61e-08,2;CL:0000805,3.61e-08,2;CL:0002425,3.61e-08,2;CL:0000542,4.60e-08,53;CL:0000051,4.60e-08,53;CL:0000791,4.39e-07,18;CL:0000789,4.39e-07,18;CL:0002420,4.39e-07,18;CL:0002419,4.39e-07,18;CL:0000790,4.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;1.38e-08;2!CL:0000790;4.85e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.73e-09!51;DOID:0060083!1.73e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.15e-07,51;DOID:0060083,4.15e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.41e-15!102;UBERON:0003061!8.41e-15!102;UBERON:0002193!1.41e-13!112;UBERON:0002384!2.74e-08!375;UBERON:0000178!3.62e-08!15;UBERON:0000179!3.62e-08!15;UBERON:0000463!3.62e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-09;2!UBERON:0005058;2.03e-09;2!UBERON:0009113;2.03e-09;2!UBERON:0000178;1.06e-08;15!UBERON:0000179;1.06e-08;15!UBERON:0000463;1.06e-08;15!UBERON:0004177;4.30e-08;5!UBERON:0005057;4.30e-08;5!UBERON:0002390;3.17e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.76e-16,4;UBERON:0005058,7.76e-16,4;UBERON:0009113,7.76e-16,4;UBERON:0003295,7.76e-16,4;UBERON:0005562,7.76e-16,4;UBERON:0004177,5.95e-14,7;UBERON:0005057,5.95e-14,7;UBERON:0003351,1.37e-10,6;UBERON:0000178,8.68e-09,15;UBERON:0000179,8.68e-09,15;UBERON:0000463,8.68e-09,15;UBERON:0002390,2.55e-07,98;UBERON:0003061,2.55e-07,98 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20273731613732,3.7766271146975,3.62069594042925,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0,0.387336002901508,0.853015394924529,0.587200878669695,0,1.20326668482085,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0.436194716338694,0,1.21292030593908,0.232429036905685,0,0.929119112685311,0.28769239232215,0,0.47296445977717,0,0,1.35426486594342,0,0.272906150057846,0.674170453335254,0.306083892370903,0,1.27867425159808,0,0.199463657621632,0,0,0,0.622822248995575,0.502497330513487,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0,0,1.09227722252426,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0.263384084775077,0.590129310341499,0,1.23360899399706,1.00311897234407,0.977766799900771,0.473447805734733,0,0.891283655081389,1.47302953737419,0.664601683750863,1.62482318259009,0.512365278902701,1.30059347559878,1.47994114143309,0.829050053357545,1.15921234294021,2.22429844743091,1.33770414044857,3.1360657141493,0,1.14966148080576,0.34362744548263,1.26509846009751,1.59282707162048,1.95325036156926,0,0.903450714466637,0.76791966692651,0,0.710331756132051,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.985153801009636,0.862510299438069,0.641715181398742,0,0,0,0,0,4.49404214368309,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,1.13929437434833,1.19115887728894,1.64544909234478,0,0.540031437238115,1.58625035258854,0,0,0,0.929015875628594,0,0.995985806877798,0.956557636372934,1.79621434289535,0,4.44514523720154,0,1.68478306868075,0,0,0,0.338583555603207,0.481764225311099,0.201799707191048,0,1.03051603426729,0,0,0,1.36771666781428,0,0,0,1.33228787199128,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0.492339221844278,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0.547364367646998,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.397429223405979,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,2.07047417247523,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,1.14495775979091,0,0,0,0.39997479170986,0.853533837553127,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0.576169937778896,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,2.79835236589801,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,2.32520075409622,3.28995985768047,0,0,0.404234377916439,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.603821380773079,0.961705476909699 | 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| ||
|short_description=p@chr12:6571231..6571263,+ | |||
}} | }} |
Latest revision as of 11:24, 24 July 2015
Short description: | p@chr12:6571231..6571263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6571231..6571263, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.66e-18 | 8 |
hematopoietic stem cell | 3.53e-16 | 168 |
hematopoietic oligopotent progenitor cell | 8.24e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.24e-16 | 161 |
hematopoietic cell | 5.60e-15 | 177 |
neutrophil | 2.06e-13 | 3 |
blood cell | 4.04e-13 | 11 |
leukocyte | 4.97e-13 | 136 |
eosinophil | 1.10e-09 | 2 |
myeloid cell | 1.71e-08 | 108 |
common myeloid progenitor | 1.71e-08 | 108 |
lymphoid lineage restricted progenitor cell | 2.89e-08 | 52 |
thymocyte | 3.61e-08 | 2 |
double negative thymocyte | 3.61e-08 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-08 | 2 |
DN4 thymocyte | 3.61e-08 | 2 |
DN1 thymic pro-T cell | 3.61e-08 | 2 |
DN2 thymocyte | 3.61e-08 | 2 |
DN3 thymocyte | 3.61e-08 | 2 |
immature single positive thymocyte | 3.61e-08 | 2 |
early T lineage precursor | 3.61e-08 | 2 |
lymphocyte | 4.60e-08 | 53 |
common lymphoid progenitor | 4.60e-08 | 53 |
mature alpha-beta T cell | 4.39e-07 | 18 |
alpha-beta T cell | 4.39e-07 | 18 |
immature T cell | 4.39e-07 | 18 |
mature T cell | 4.39e-07 | 18 |
immature alpha-beta T cell | 4.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.76e-16 | 4 |
hemolymphoid system gland | 7.76e-16 | 4 |
thymic region | 7.76e-16 | 4 |
pharyngeal gland | 7.76e-16 | 4 |
thymus primordium | 7.76e-16 | 4 |
hemopoietic organ | 5.95e-14 | 7 |
immune organ | 5.95e-14 | 7 |
pharyngeal epithelium | 1.37e-10 | 6 |
blood | 8.68e-09 | 15 |
haemolymphatic fluid | 8.68e-09 | 15 |
organism substance | 8.68e-09 | 15 |
hematopoietic system | 2.55e-07 | 98 |
blood island | 2.55e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.15e-07 | 51 |
immune system cancer | 4.15e-07 | 51 |