FFCP PHASE1:Hg19::chr12:6484832..6484841,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6484832..6484841,+ | |||
|description=CAGE_peak_at_chr12:6484832..6484841,+ | |description=CAGE_peak_at_chr12:6484832..6484841,+ | ||
|id=chr12:6484832..6484841,+ | |id=chr12:6484832..6484841,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.01e-11!3;CL:1000615!1.01e-11!3;CL:0002306!1.01e-11!3;CL:0000083!1.08e-08!4;CL:0000223!3.63e-08!59;CL:0002536!4.96e-08!2;CL:0000066!2.21e-07!254;CL:0002076!2.81e-07!43 | |ontology_enrichment_celltype=CL:0000239!1.01e-11!3;CL:1000615!1.01e-11!3;CL:0002306!1.01e-11!3;CL:0000083!1.08e-08!4;CL:0000223!3.63e-08!59;CL:0002536!4.96e-08!2;CL:0000066!2.21e-07!254;CL:0002076!2.81e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000239;3.66e-23;3!CL:1000615;3.66e-23;3!CL:0002306;3.66e-23;3!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:1000507;6.34e-08;10!CL:1000494;6.34e-08;10!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |ontology_enrichment_celltype_v019=CL:0000239;3.66e-23;3!CL:1000615;3.66e-23;3!CL:0002306;3.66e-23;3!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:1000507;6.34e-08;10!CL:1000494;6.34e-08;10!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.27e-23,3;CL:1000615,3.27e-23,3;CL:0002306,3.27e-23,3;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7;CL:1000507,6.13e-08,10;CL:1000494,6.13e-08,10;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | ||
|ontology_enrichment_disease=DOID:305!4.14e-09!106;DOID:1793!1.08e-08!4;DOID:4074!2.92e-08!2;DOID:4905!2.92e-08!2;DOID:3498!2.92e-08!2;DOID:1749!3.42e-08!14 | |ontology_enrichment_disease=DOID:305!4.14e-09!106;DOID:1793!1.08e-08!4;DOID:4074!2.92e-08!2;DOID:4905!2.92e-08!2;DOID:3498!2.92e-08!2;DOID:1749!3.42e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!1.01e-11!3;UBERON:0007685!1.01e-11!3;UBERON:0004134!1.01e-11!3;UBERON:0003127!1.34e-07!2;UBERON:0001007!2.07e-07!155;UBERON:0001555!2.07e-07!155;UBERON:0007026!2.07e-07!155;UBERON:0000464!2.22e-07!104;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169 | |ontology_enrichment_uberon=UBERON:0006853!1.01e-11!3;UBERON:0007685!1.01e-11!3;UBERON:0004134!1.01e-11!3;UBERON:0003127!1.34e-07!2;UBERON:0001007!2.07e-07!155;UBERON:0001555!2.07e-07!155;UBERON:0007026!2.07e-07!155;UBERON:0000464!2.22e-07!104;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.66e-23;3!UBERON:0007685;3.66e-23;3!UBERON:0004134;3.66e-23;3!UBERON:0000473;1.24e-09;8!UBERON:0004211;6.34e-08;10!UBERON:0009773;6.34e-08;10!UBERON:0001231;6.34e-08;10!UBERON:0004810;6.34e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0006853;3.66e-23;3!UBERON:0007685;3.66e-23;3!UBERON:0004134;3.66e-23;3!UBERON:0000473;1.24e-09;8!UBERON:0004211;6.34e-08;10!UBERON:0009773;6.34e-08;10!UBERON:0001231;6.34e-08;10!UBERON:0004810;6.34e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.27e-23,3;UBERON:0007685,3.27e-23,3;UBERON:0004134,3.27e-23,3;UBERON:0000473,1.24e-09,8;UBERON:0004810,6.13e-08,10;UBERON:0003135,2.32e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12 | |||
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| ||
|short_description=p@chr12:6484832..6484841,+ | |short_description=p@chr12:6484832..6484841,+ | ||
}} | }} |
Latest revision as of 11:17, 24 July 2015
Short description: | p@chr12:6484832..6484841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6484832..6484841, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.27e-23 | 3 |
kidney cortex tubule cell | 3.27e-23 | 3 |
epithelial cell of proximal tubule | 3.27e-23 | 3 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
kidney tubule cell | 6.13e-08 | 10 |
nephron tubule epithelial cell | 6.13e-08 | 10 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.27e-23 | 3 |
region of nephron tubule | 3.27e-23 | 3 |
proximal tubule | 3.27e-23 | 3 |
testis | 1.24e-09 | 8 |
nephron tubule epithelium | 6.13e-08 | 10 |
male reproductive organ | 2.32e-07 | 11 |
cortex of kidney | 7.92e-07 | 12 |
renal parenchyma | 7.92e-07 | 12 |