FFCP PHASE1:Hg19::chr12:5915515..5915529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:5915515..5915529,- | |||
|description=CAGE_peak_at_chr12:5915515..5915529,- | |description=CAGE_peak_at_chr12:5915515..5915529,- | ||
|id=chr12:5915515..5915529,- | |id=chr12:5915515..5915529,- | ||
|ontology_enrichment_celltype=CL:0000188!8.33e-13!9;CL:0000066!2.39e-09!254;CL:0000594!3.28e-07!3;CL:0002586!5.06e-07!3 | |ontology_enrichment_celltype=CL:0000188!8.33e-13!9;CL:0000066!2.39e-09!254;CL:0000594!3.28e-07!3;CL:0002586!5.06e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.08e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.01e-38;29!UBERON:0006595;2.41e-07;86 | |||
|ontology_enrichment_disease=DOID:305!5.91e-17!106;DOID:0050687!3.23e-15!143;DOID:162!1.44e-12!235;DOID:14566!3.63e-12!239;DOID:4362!5.33e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.33e-10;1!DOID:305;2.24e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.28e-20,106;DOID:0050687,1.06e-16,143;DOID:162,8.72e-12,235;DOID:14566,1.76e-11,239;DOID:6193,1.21e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.70e-44!9;UBERON:0001557!1.29e-24!19;UBERON:0008947!3.08e-16!38;UBERON:0003258!3.08e-16!38;UBERON:0000072!2.08e-15!46;UBERON:0000065!5.38e-13!53;UBERON:0001004!7.86e-09!72;UBERON:0000063!5.07e-08!97;UBERON:0001041!5.87e-08!98;UBERON:0000002!1.43e-07!6;UBERON:0001560!1.43e-07!6;UBERON:0001781!5.06e-07!3;UBERON:0001782!5.06e-07!3;UBERON:0005424!5.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.25e-85;9!UBERON:0001557;3.25e-85;9!UBERON:0000072;5.03e-27;37!UBERON:0000065;6.06e-23;44!UBERON:0001004;2.53e-13;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.10e-85,9;UBERON:0001557,2.48e-49,19;UBERON:0008947,5.98e-29,38;UBERON:0003258,5.98e-29,38;UBERON:0000072,1.15e-27,47;UBERON:0000065,7.66e-24,54;UBERON:0001004,6.77e-17,74;UBERON:0001041,1.25e-16,87;UBERON:0004921,1.35e-11,118;UBERON:0004119,1.92e-09,160;UBERON:0000925,1.92e-09,160;UBERON:0006595,1.92e-09,160;UBERON:0001007,4.66e-09,145;UBERON:0001555,4.66e-09,145;UBERON:0007026,4.66e-09,145;UBERON:0001048,9.65e-07,160 | |||
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|short_description=p@chr12:5915515..5915529,- | |short_description=p@chr12:5915515..5915529,- | ||
}} | }} |
Latest revision as of 11:01, 24 July 2015
Short description: | p@chr12:5915515..5915529, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:5915515..5915529, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.08e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.10e-85 | 9 |
upper respiratory tract | 2.48e-49 | 19 |
respiratory primordium | 5.98e-29 | 38 |
endoderm of foregut | 5.98e-29 | 38 |
segment of respiratory tract | 1.15e-27 | 47 |
respiratory tract | 7.66e-24 | 54 |
respiratory system | 6.77e-17 | 74 |
foregut | 1.25e-16 | 87 |
subdivision of digestive tract | 1.35e-11 | 118 |
endoderm-derived structure | 1.92e-09 | 160 |
endoderm | 1.92e-09 | 160 |
presumptive endoderm | 1.92e-09 | 160 |
digestive system | 4.66e-09 | 145 |
digestive tract | 4.66e-09 | 145 |
primitive gut | 4.66e-09 | 145 |
primordium | 9.65e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-20 | 106 |
cell type cancer | 1.06e-16 | 143 |
cancer | 8.72e-12 | 235 |
disease of cellular proliferation | 1.76e-11 | 239 |
epithelioid sarcoma | 1.21e-10 | 1 |