FFCP PHASE1:Hg19::chr12:53438222..53438234,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:53438222..53438234,+ to FFCP PHASE1:Hg19::chr12:53438222..53438234,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53438222..53438234,+ | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr12:53438222..53438234,+ | |||
|id=chr12:53438222..53438234,+ | |||
|ontology_enrichment_celltype=CL:0000148!5.09e-14!10;CL:0000541!5.09e-14!10;CL:0002567!7.97e-10!3;CL:0000147!1.15e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.27e-26;10!CL:0000147;9.99e-19;14!CL:0002567;3.33e-15;3!CL:0000710;4.28e-13;20!CL:0002566;8.17e-12;1!CL:0000075;1.13e-09;27!CL:0002077;4.85e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.29e-26,10;CL:0000541,3.29e-26,10;CL:0000147,1.00e-18,14;CL:0002567,2.80e-15,3;CL:0000710,4.29e-13,20;CL:0002566,1.81e-11,1;CL:0000075,1.13e-09,27;CL:0002077,1.18e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.93e-12;1!UBERON:0006601;5.35e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.11e-55!57;UBERON:0005068!9.11e-55!57;UBERON:0006241!9.11e-55!57;UBERON:0007135!9.11e-55!57;UBERON:0007023!1.17e-50!115;UBERON:0002616!2.50e-43!59;UBERON:0002780!2.15e-42!41;UBERON:0001890!2.15e-42!41;UBERON:0006240!2.15e-42!41;UBERON:0003075!8.11e-42!86;UBERON:0007284!8.11e-42!86;UBERON:0001017!2.02e-41!82;UBERON:0005743!2.42e-41!86;UBERON:0003080!3.18e-41!42;UBERON:0001893!1.75e-40!34;UBERON:0002020!2.63e-40!34;UBERON:0003528!2.63e-40!34;UBERON:0002346!1.73e-39!90;UBERON:0000073!8.31e-39!94;UBERON:0001016!8.31e-39!94;UBERON:0002791!3.44e-38!33;UBERON:0000955!1.15e-37!69;UBERON:0006238!1.15e-37!69;UBERON:0001869!9.70e-36!32;UBERON:0003056!2.06e-28!61;UBERON:0004121!1.27e-25!169;UBERON:0000924!9.36e-25!173;UBERON:0006601!9.36e-25!173;UBERON:0002308!2.20e-24!9;UBERON:0000125!2.20e-24!9;UBERON:0000033!4.45e-24!123;UBERON:0002619!5.89e-24!22;UBERON:0000153!6.73e-24!129;UBERON:0007811!6.73e-24!129;UBERON:0001950!3.77e-23!20;UBERON:0000956!9.77e-21!25;UBERON:0000203!9.77e-21!25;UBERON:0009663!2.83e-19!7;UBERON:0002420!4.32e-19!9;UBERON:0007245!4.32e-19!9;UBERON:0010009!4.32e-19!9;UBERON:0010011!4.32e-19!9;UBERON:0000454!4.32e-19!9;UBERON:0002298!3.33e-17!8;UBERON:0000025!1.92e-14!194;UBERON:0003076!3.64e-14!15;UBERON:0003057!3.64e-14!15;UBERON:0004111!2.38e-13!241;UBERON:0000200!1.81e-11!6;UBERON:0000369!2.90e-11!4;UBERON:0002435!2.90e-11!4;UBERON:0000204!2.90e-11!4;UBERON:0010082!2.90e-11!4;UBERON:0000477!7.47e-11!286;UBERON:0004732!2.48e-10!13;UBERON:0000483!5.87e-10!309;UBERON:0000119!9.48e-10!312;UBERON:0002021!1.05e-09!5;UBERON:0001896!1.42e-09!3;UBERON:0005290!1.42e-09!3;UBERON:0010096!1.42e-09!3;UBERON:0000988!1.73e-09!3;UBERON:0006331!2.71e-09!3;UBERON:0002240!3.03e-09!3;UBERON:0002771!6.22e-09!3;UBERON:0005383!1.10e-08!3;UBERON:0005382!1.10e-08!3;UBERON:0001871!1.34e-08!7;UBERON:0004733!2.85e-08!12;UBERON:0002028!2.85e-08!12;UBERON:0007277!2.85e-08!12;UBERON:0000475!2.91e-08!365;UBERON:0000064!8.03e-08!219;UBERON:0005162!1.99e-07!2;UBERON:0000122!1.99e-07!2;UBERON:0001875!3.02e-07!2;UBERON:0006514!3.02e-07!2;UBERON:0001897!4.42e-07!2;UBERON:0002148!8.58e-07!2;UBERON:0009662!8.58e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;9.65e-23;2!UBERON:0000122;9.65e-23;2!UBERON:0001875;7.40e-22;2!UBERON:0006514;7.40e-22;2!UBERON:0009663;4.85e-14;7!UBERON:0001893;8.60e-14;34!UBERON:0002336;2.93e-12;1!UBERON:0000941;2.93e-12;1!UBERON:0001785;2.93e-12;1!UBERON:0002464;2.93e-12;1!UBERON:0004904;2.93e-12;1!UBERON:0011215;2.93e-12;1!UBERON:0001018;2.93e-12;1!UBERON:0001021;2.93e-12;1!UBERON:0002473;2.93e-12;1!UBERON:0005340;2.93e-12;1!UBERON:0003544;2.93e-12;1!UBERON:0005970;2.93e-12;1!UBERON:0002316;2.93e-12;1!UBERON:0001020;2.93e-12;1!UBERON:0002437;2.93e-12;1!UBERON:0002780;1.39e-11;41!UBERON:0001890;1.39e-11;41!UBERON:0002420;4.76e-11;9!UBERON:0000125;4.76e-11;9!UBERON:0007245;4.76e-11;9!UBERON:0002308;4.76e-11;9!UBERON:0010009;4.76e-11;9!UBERON:0010011;4.76e-11;9!UBERON:0000454;4.76e-11;9!UBERON:0002791;1.84e-10;32!UBERON:0001869;1.84e-10;32!UBERON:0000073;9.77e-10;53!UBERON:0002616;9.77e-10;53!UBERON:0003528;1.12e-09;34!UBERON:0002020;1.12e-09;34!UBERON:0002021;2.57e-09;5!UBERON:0002298;6.59e-08;6!UBERON:0004732;6.62e-08;13!UBERON:0003714;9.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,8.70e-23,2;UBERON:0000122,8.70e-23,2;UBERON:0001875,3.93e-22,2;UBERON:0006514,3.93e-22,2;UBERON:0001049,1.11e-20,56;UBERON:0005068,1.11e-20,56;UBERON:0006241,1.11e-20,56;UBERON:0007135,1.11e-20,56;UBERON:0000073,4.58e-18,53;UBERON:0002616,4.58e-18,53;UBERON:0003075,1.68e-16,82;UBERON:0007284,1.68e-16,82;UBERON:0002346,1.16e-15,86;UBERON:0002780,4.18e-15,41;UBERON:0001890,4.18e-15,41;UBERON:0003080,4.18e-15,41;UBERON:0006240,4.18e-15,41;UBERON:0010371,5.40e-15,104;UBERON:0001016,1.03e-14,89;UBERON:0009663,3.04e-14,7;UBERON:0001893,4.60e-14,34;UBERON:0001017,1.02e-13,81;UBERON:0000955,1.25e-13,68;UBERON:0006238,1.25e-13,68;UBERON:0003056,1.24e-12,61;UBERON:0000941,2.63e-12,1;UBERON:0001785,2.63e-12,1;UBERON:0002464,2.63e-12,1;UBERON:0004904,2.63e-12,1;UBERON:0001021,2.63e-12,1;UBERON:0003902,2.63e-12,1;UBERON:0005425,2.63e-12,1;UBERON:0002336,2.93e-12,1;UBERON:0011215,2.93e-12,1;UBERON:0001018,2.93e-12,1;UBERON:0002473,2.93e-12,1;UBERON:0005340,2.93e-12,1;UBERON:0003544,2.93e-12,1;UBERON:0005970,2.93e-12,1;UBERON:0002316,2.93e-12,1;UBERON:0001020,2.93e-12,1;UBERON:0002437,2.93e-12,1;UBERON:0007023,1.56e-11,114;UBERON:0002420,3.32e-11,9;UBERON:0000125,3.32e-11,9;UBERON:0007245,3.32e-11,9;UBERON:0002308,3.32e-11,9;UBERON:0010009,3.32e-11,9;UBERON:0010011,3.32e-11,9;UBERON:0000454,3.32e-11,9;UBERON:0002791,4.90e-11,32;UBERON:0001869,4.90e-11,32;UBERON:0003528,2.20e-10,34;UBERON:0002020,2.20e-10,34;UBERON:0010314,1.25e-09,132;UBERON:0002021,2.80e-09,5;UBERON:0004121,2.88e-08,171;UBERON:0000924,2.88e-08,171;UBERON:0006601,2.88e-08,171;UBERON:0002298,6.16e-08,6;UBERON:0004732,6.17e-08,13;UBERON:0003076,7.65e-07,15;UBERON:0003057,7.65e-07,15;UBERON:0003714,8.93e-07,2 | |||
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| ||
|short_description=p@chr12:53438222..53438234,+ | |||
}} | }} |
Latest revision as of 09:44, 24 July 2015
Short description: | p@chr12:53438222..53438234, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53438222..53438234, + |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.29e-26 | 10 |
melanoblast | 3.29e-26 | 10 |
pigment cell | 1.00e-18 | 14 |
light melanocyte | 2.80e-15 | 3 |
neurecto-epithelial cell | 4.29e-13 | 20 |
dark melanocyte | 1.81e-11 | 1 |
columnar/cuboidal epithelial cell | 1.13e-09 | 27 |
ecto-epithelial cell | 1.18e-07 | 34 |