FFCP PHASE1:Hg19::chr12:53201551..53201566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53201551..53201566,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr12:53201551..53201566,+ | |description=CAGE_peak_at_chr12:53201551..53201566,+ | ||
|id=chr12:53201551..53201566,+ | |id=chr12:53201551..53201566,+ | ||
|ontology_enrichment_celltype=CL:0002368!7.17e-12!13;CL:0002202!4.06e-10!9;CL:0002632!4.06e-10!9 | |ontology_enrichment_celltype=CL:0002368!7.17e-12!13;CL:0002202!4.06e-10!9;CL:0002632!4.06e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000307;3.24e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.05e-34;1!UBERON:0008814;9.07e-18;2!UBERON:0010056;9.07e-18;2!CL:0000377;3.24e-12;3 | |||
|ontology_enrichment_disease=DOID:3151!6.14e-11!1;DOID:3149!6.14e-11!1 | |ontology_enrichment_disease=DOID:3151!6.14e-11!1;DOID:3149!6.14e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!8.72e-20!2;UBERON:0007196!7.84e-17!14;UBERON:0001558!7.84e-17!14;UBERON:0001723!4.42e-14!3;UBERON:0001033!4.42e-14!3;UBERON:0010056!4.42e-14!3;UBERON:0000065!2.25e-13!53;UBERON:0003126!7.77e-13!7;UBERON:0001005!7.77e-13!7;UBERON:0000072!2.18e-12!46;UBERON:0002372!2.79e-11!1;UBERON:0001961!2.79e-11!1;UBERON:0001744!2.79e-11!1;UBERON:0001735!2.79e-11!1;UBERON:0005178!1.11e-09!34;UBERON:0002224!1.11e-09!34;UBERON:0001004!1.61e-09!72;UBERON:0001042!1.94e-09!10;UBERON:0009145!1.94e-09!10;UBERON:0005181!2.15e-09!35;UBERON:0006562!1.26e-08!11;UBERON:0000002!3.57e-07!6;UBERON:0001560!3.57e-07!6 | |ontology_enrichment_uberon=UBERON:0003127!8.72e-20!2;UBERON:0007196!7.84e-17!14;UBERON:0001558!7.84e-17!14;UBERON:0001723!4.42e-14!3;UBERON:0001033!4.42e-14!3;UBERON:0010056!4.42e-14!3;UBERON:0000065!2.25e-13!53;UBERON:0003126!7.77e-13!7;UBERON:0001005!7.77e-13!7;UBERON:0000072!2.18e-12!46;UBERON:0002372!2.79e-11!1;UBERON:0001961!2.79e-11!1;UBERON:0001744!2.79e-11!1;UBERON:0001735!2.79e-11!1;UBERON:0005178!1.11e-09!34;UBERON:0002224!1.11e-09!34;UBERON:0001004!1.61e-09!72;UBERON:0001042!1.94e-09!10;UBERON:0009145!1.94e-09!10;UBERON:0005181!2.15e-09!35;UBERON:0006562!1.26e-08!11;UBERON:0000002!3.57e-07!6;UBERON:0001560!3.57e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.53e-44;3!UBERON:0001033;1.53e-44;3!UBERON:0002372;2.58e-34;1!UBERON:0001961;2.58e-34;1!UBERON:0001744;2.58e-34;1!UBERON:0001042;2.58e-34;1!UBERON:0001735;2.58e-34;1!UBERON:0000341;5.48e-18;2!UBERON:0006562;6.48e-18;2!UBERON:0001043;2.59e-12;3!UBERON:0000165;2.21e-11;28!UBERON:0000974;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.53e-44,3;UBERON:0001033,1.53e-44,3;UBERON:0010056,1.53e-44,3;UBERON:0002372,2.58e-34,1;UBERON:0001961,2.58e-34,1;UBERON:0001744,2.58e-34,1;UBERON:0001735,2.58e-34,1;UBERON:0001042,2.51e-30,10;UBERON:0009145,2.51e-30,10;UBERON:0006562,1.17e-27,11;UBERON:0000341,5.48e-18,2;UBERON:0001557,2.16e-16,19;UBERON:0000166,2.85e-14,22;UBERON:0001043,2.59e-12,3;UBERON:0009143,2.59e-12,3;UBERON:0000072,8.63e-12,47;UBERON:0000165,5.14e-11,29;UBERON:0000930,5.14e-11,29;UBERON:0000065,2.46e-10,54;UBERON:0001041,6.36e-10,87;UBERON:0000153,4.07e-09,62;UBERON:0007811,4.07e-09,62;UBERON:0000161,5.14e-09,36;UBERON:0008814,2.51e-08,18;UBERON:0001004,1.11e-07,74;UBERON:0004921,2.35e-07,118;UBERON:0001444,8.40e-07,49 | |||
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|short_description=p@chr12:53201551..53201566,+ | |short_description=p@chr12:53201551..53201566,+ | ||
}} | }} |
Latest revision as of 09:41, 24 July 2015
Short description: | p@chr12:53201551..53201566, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53201551..53201566, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.53e-44 | 3 |
gustatory system | 1.53e-44 | 3 |
future tongue | 1.53e-44 | 3 |
tonsil | 2.58e-34 | 1 |
mucosa-associated lymphoid tissue | 2.58e-34 | 1 |
lymphoid tissue | 2.58e-34 | 1 |
tonsillar ring | 2.58e-34 | 1 |
chordate pharynx | 2.51e-30 | 10 |
pharyngeal region of foregut | 2.51e-30 | 10 |
pharynx | 1.17e-27 | 11 |
throat | 5.48e-18 | 2 |
upper respiratory tract | 2.16e-16 | 19 |
oral opening | 2.85e-14 | 22 |
esophagus | 2.59e-12 | 3 |
esophageal region | 2.59e-12 | 3 |
segment of respiratory tract | 8.63e-12 | 47 |
mouth | 5.14e-11 | 29 |
stomodeum | 5.14e-11 | 29 |
respiratory tract | 2.46e-10 | 54 |
foregut | 6.36e-10 | 87 |
anterior region of body | 4.07e-09 | 62 |
craniocervical region | 4.07e-09 | 62 |
orifice | 5.14e-09 | 36 |
pharyngeal arch system | 2.51e-08 | 18 |
respiratory system | 1.11e-07 | 74 |
subdivision of digestive tract | 2.35e-07 | 118 |
subdivision of head | 8.40e-07 | 49 |