FFCP PHASE1:Hg19::chr12:53200712..53200723,-: Difference between revisions
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|id=chr12:53200712..53200723,-
|short_description=p@chr12:53200712..53200723,-
|description=CAGE_peak_at_chr12:53200712..53200723,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53200712..53200723,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200712..53200723,- | |||
|id=chr12:53200712..53200723,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.21e-40;1!UBERON:0008814;4.21e-21;2!UBERON:0010056;4.21e-21;2 | |||
|ontology_enrichment_disease=DOID:178!4.15e-11!1;DOID:326!4.15e-11!1;DOID:3978!4.15e-11!1;DOID:3394!4.15e-11!1;DOID:5844!4.15e-11!1;DOID:3151!4.58e-11!1;DOID:3149!4.58e-11!1;DOID:1749!6.87e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!1.01e-15!10;UBERON:0009145!1.01e-15!10;UBERON:0006562!2.58e-14!11;UBERON:0001723!3.41e-14!3;UBERON:0001033!3.41e-14!3;UBERON:0010056!3.41e-14!3;UBERON:0002372!3.76e-11!1;UBERON:0001961!3.76e-11!1;UBERON:0001744!3.76e-11!1;UBERON:0001735!3.76e-11!1;UBERON:0000989!6.14e-11!1;UBERON:0008811!6.14e-11!1;UBERON:0006258!6.14e-11!1;UBERON:0005876!6.14e-11!1;UBERON:0004874!6.14e-11!1;UBERON:0000997!1.46e-10!1;UBERON:0005056!1.46e-10!1;UBERON:0000161!1.93e-09!35;UBERON:0000974!4.38e-09!10;UBERON:0001557!2.31e-08!19;UBERON:0000166!1.29e-07!21;UBERON:0000002!2.37e-07!6;UBERON:0001560!2.37e-07!6;UBERON:0000072!4.71e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.47e-53;3!UBERON:0001033;1.47e-53;3!UBERON:0002372;3.30e-40;1!UBERON:0001961;3.30e-40;1!UBERON:0001744;3.30e-40;1!UBERON:0001042;3.30e-40;1!UBERON:0001735;3.30e-40;1!UBERON:0000341;4.21e-21;2!UBERON:0006562;6.96e-21;2!UBERON:0001043;1.83e-14;3!UBERON:0000165;1.49e-13;28!UBERON:0000020;5.97e-08;23!UBERON:0000974;6.13e-08;6!UBERON:0001032;1.17e-07;24!UBERON:0004456;1.17e-07;24!UBERON:0000153;1.92e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.68e-53,3;UBERON:0001033,1.68e-53,3;UBERON:0010056,1.68e-53,3;UBERON:0002372,3.30e-40,1;UBERON:0001961,3.30e-40,1;UBERON:0001744,3.30e-40,1;UBERON:0001735,3.30e-40,1;UBERON:0001042,3.44e-36,10;UBERON:0009145,3.44e-36,10;UBERON:0006562,5.35e-33,11;UBERON:0000341,3.81e-21,2;UBERON:0001557,1.58e-19,19;UBERON:0000166,5.41e-17,22;UBERON:0001043,1.83e-14,3;UBERON:0009143,1.83e-14,3;UBERON:0000165,4.18e-13,29;UBERON:0000930,4.18e-13,29;UBERON:0000153,6.50e-11,62;UBERON:0007811,6.50e-11,62;UBERON:0000161,1.02e-10,36;UBERON:0008814,7.10e-10,18;UBERON:0000072,2.16e-08,47;UBERON:0001444,4.43e-08,49;UBERON:0001041,6.09e-08,87;UBERON:0000020,1.19e-07,24;UBERON:0001032,1.19e-07,24;UBERON:0004456,1.19e-07,24;UBERON:0000065,2.12e-07,54;UBERON:0000033,3.68e-07,56 | |||
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|short_description=p@chr12:53200712..53200723,- | |||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200712..53200723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200712..53200723, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.68e-53 | 3 |
gustatory system | 1.68e-53 | 3 |
future tongue | 1.68e-53 | 3 |
tonsil | 3.30e-40 | 1 |
mucosa-associated lymphoid tissue | 3.30e-40 | 1 |
lymphoid tissue | 3.30e-40 | 1 |
tonsillar ring | 3.30e-40 | 1 |
chordate pharynx | 3.44e-36 | 10 |
pharyngeal region of foregut | 3.44e-36 | 10 |
pharynx | 5.35e-33 | 11 |
throat | 3.81e-21 | 2 |
upper respiratory tract | 1.58e-19 | 19 |
oral opening | 5.41e-17 | 22 |
esophagus | 1.83e-14 | 3 |
esophageal region | 1.83e-14 | 3 |
mouth | 4.18e-13 | 29 |
stomodeum | 4.18e-13 | 29 |
anterior region of body | 6.50e-11 | 62 |
craniocervical region | 6.50e-11 | 62 |
orifice | 1.02e-10 | 36 |
pharyngeal arch system | 7.10e-10 | 18 |
segment of respiratory tract | 2.16e-08 | 47 |
subdivision of head | 4.43e-08 | 49 |
foregut | 6.09e-08 | 87 |
sense organ | 1.19e-07 | 24 |
sensory system | 1.19e-07 | 24 |
entire sense organ system | 1.19e-07 | 24 |
respiratory tract | 2.12e-07 | 54 |
head | 3.68e-07 | 56 |