FFCP PHASE1:Hg19::chr12:53200456..53200478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-375bp_to_CU692075_5end | |||
|cluster_id=chr12:53200456..53200478,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_CU692075_5end | |||
|id=chr12:53200456..53200478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.48e-30;1!UBERON:0008814;1.78e-15;2!UBERON:0010056;1.78e-15;2 | |||
|ontology_enrichment_disease=DOID:3151!1.40e-12!1;DOID:3149!1.40e-12!1;DOID:178!2.46e-12!1;DOID:326!2.46e-12!1;DOID:3978!2.46e-12!1;DOID:3394!2.46e-12!1;DOID:5844!2.46e-12!1;DOID:3451!6.42e-07!2;DOID:4159!6.42e-07!2;DOID:0060122!6.42e-07!2;DOID:114!8.52e-07!2;DOID:3910!9.02e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.64e-29;1!DOID:3149;3.64e-29;1!DOID:3451;2.55e-15;2!DOID:4159;2.55e-15;2!DOID:0060122;2.55e-15;2!DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.20e-29,1;DOID:3149,4.20e-29,1;DOID:3451,2.74e-15,2;DOID:4159,2.74e-15,2;DOID:0060122,2.74e-15,2;DOID:4362,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001723!3.69e-16!3;UBERON:0001033!3.69e-16!3;UBERON:0010056!3.69e-16!3;UBERON:0002372!7.89e-13!1;UBERON:0001961!7.89e-13!1;UBERON:0001744!7.89e-13!1;UBERON:0001735!7.89e-13!1;UBERON:0005795!1.84e-12!22;UBERON:0000989!1.96e-12!1;UBERON:0008811!1.96e-12!1;UBERON:0006258!1.96e-12!1;UBERON:0005876!1.96e-12!1;UBERON:0004874!1.96e-12!1;UBERON:0006834!3.85e-12!1;UBERON:0001042!7.32e-11!10;UBERON:0009145!7.32e-11!10;UBERON:0006562!6.37e-10!11;UBERON:0000995!1.21e-08!21;UBERON:0000002!2.02e-08!6;UBERON:0001560!2.02e-08!6;UBERON:0003975!2.94e-08!22;UBERON:0004175!2.75e-07!25;UBERON:0000341!6.80e-07!2;UBERON:0004903!9.02e-07!2;UBERON:0002173!9.02e-07!2;UBERON:0002186!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.49e-38;3!UBERON:0001033;1.49e-38;3!UBERON:0002372;9.99e-30;1!UBERON:0001961;9.99e-30;1!UBERON:0001744;9.99e-30;1!UBERON:0001042;9.99e-30;1!UBERON:0001735;9.99e-30;1!UBERON:0006562;1.33e-15;2!UBERON:0001043;6.73e-11;3!UBERON:0000165;7.35e-10;28!UBERON:0000014;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.49e-38,3;UBERON:0001033,1.49e-38,3;UBERON:0010056,1.49e-38,3;UBERON:0002372,9.99e-30,1;UBERON:0001961,9.99e-30,1;UBERON:0001744,9.99e-30,1;UBERON:0001735,9.99e-30,1;UBERON:0001042,3.30e-26,10;UBERON:0009145,3.30e-26,10;UBERON:0006562,6.61e-24,11;UBERON:0001557,3.46e-14,19;UBERON:0000166,2.35e-12,22;UBERON:0001043,6.73e-11,3;UBERON:0009143,6.73e-11,3;UBERON:0000165,1.52e-09,29;UBERON:0000930,1.52e-09,29;UBERON:0000014,2.61e-08,4;UBERON:0000161,8.15e-08,36;UBERON:0008814,2.77e-07,18 | |||
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|short_description=p2@CU692075 | |||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p2@CU692075 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU692075_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -375bp_to_CU692075_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.49e-38 | 3 |
gustatory system | 1.49e-38 | 3 |
future tongue | 1.49e-38 | 3 |
tonsil | 9.99e-30 | 1 |
mucosa-associated lymphoid tissue | 9.99e-30 | 1 |
lymphoid tissue | 9.99e-30 | 1 |
tonsillar ring | 9.99e-30 | 1 |
chordate pharynx | 3.30e-26 | 10 |
pharyngeal region of foregut | 3.30e-26 | 10 |
pharynx | 6.61e-24 | 11 |
upper respiratory tract | 3.46e-14 | 19 |
oral opening | 2.35e-12 | 22 |
esophagus | 6.73e-11 | 3 |
esophageal region | 6.73e-11 | 3 |
mouth | 1.52e-09 | 29 |
stomodeum | 1.52e-09 | 29 |
zone of skin | 2.61e-08 | 4 |
orifice | 8.15e-08 | 36 |
pharyngeal arch system | 2.77e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.20e-29 | 1 |
keratoacanthoma | 4.20e-29 | 1 |
skin carcinoma | 2.74e-15 | 2 |
skin cancer | 2.74e-15 | 2 |
integumentary system cancer | 2.74e-15 | 2 |
cervical cancer | 6.04e-07 | 5 |