FFCP PHASE1:Hg19::chr12:52680234..52680245,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52680234..52680245,- to FFCP PHASE1:Hg19::chr12:52680234..52680245,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52680234..52680245,- | |||
|coexpression_cluster_id=C526 | |||
|description=CAGE_peak_at_chr12:52680234..52680245,- | |||
|id=chr12:52680234..52680245,- | |||
|ontology_enrichment_celltype=CL:1000415!6.17e-12!2;CL:0000066!4.98e-11!254;CL:1000497!2.66e-07!18;CL:0002518!2.66e-07!18;CL:0002379!2.95e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002379;1.53e-21;1!CL:1000415;3.70e-11;2!CL:0002535;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.53e-21,1;CL:0002535,3.70e-11,2;CL:1000415,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;5.73e-08;3!UBERON:0003353;5.73e-08;3!UBERON:0009497;4.13e-07;13 | |||
|ontology_enrichment_disease=DOID:305!2.74e-14!106;DOID:0050687!3.24e-12!143;DOID:1749!1.88e-09!14;DOID:162!3.83e-09!235;DOID:14566!7.60e-09!239;DOID:7!6.07e-08!39;DOID:3620!2.95e-07!1;DOID:3565!2.95e-07!1;DOID:5662!7.39e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.53e-21;1!DOID:3565;1.53e-21;1!DOID:4362;1.12e-16;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.53e-21,1;DOID:3565,1.53e-21,1;DOID:4362,1.21e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.04e-19!7;UBERON:0001173!1.04e-19!7;UBERON:0004912!1.04e-19!7;UBERON:0002394!2.96e-13!4;UBERON:0003928!2.96e-13!4;UBERON:0000058!1.71e-09!26;UBERON:0002110!3.06e-08!3;UBERON:0006242!3.06e-08!3;UBERON:0009497!1.93e-07!25;UBERON:0000015!1.93e-07!25;UBERON:0002423!1.93e-07!25;UBERON:0006235!1.93e-07!25;UBERON:0004161!1.93e-07!25;UBERON:0003929!8.81e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.76e-26;7!UBERON:0001173;3.76e-26;7!UBERON:0002394;5.72e-21;4!UBERON:0003928;5.72e-21;4!UBERON:0000002;4.53e-14;6!UBERON:0001560;4.53e-14;6!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2!UBERON:0000058;5.57e-09;10!UBERON:0002110;7.26e-08;3!UBERON:0002423;8.41e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.85e-20,9;UBERON:0001173,1.85e-20,9;UBERON:0004912,1.85e-20,9;UBERON:0002394,2.49e-14,6;UBERON:0003928,2.49e-14,6;UBERON:0000002,4.84e-14,6;UBERON:0001560,4.84e-14,6;UBERON:0006955,3.70e-11,2;UBERON:0004801,3.70e-11,2;UBERON:0002110,8.29e-08,3;UBERON:0006242,8.29e-08,3;UBERON:0009497,8.82e-08,25;UBERON:0000015,8.82e-08,25;UBERON:0002423,8.82e-08,25;UBERON:0006235,8.82e-08,25;UBERON:0004161,8.82e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72667283892012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0,0.451199612907412,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,2.51631383212515,3.40140231883657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,1.21882889212564,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,3.56309004081552,0,0,0.195551382734803,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,12.9396200833994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,1.53867458491389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.118193840883968,2.11339663594931,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72667283892012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0,0.451199612907412,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,2.51631383212515,3.40140231883657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,1.21882889212564,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,3.56309004081552,0,0,0.195551382734803,1.04206466326994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,12.9396200833994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,1.53867458491389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.118193840883968,2.11339663594931,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:52680234..52680245,- | |||
}} | }} |
Latest revision as of 09:31, 24 July 2015
Short description: | p@chr12:52680234..52680245, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52680234..52680245, - |
Coexpression cluster: | C526_meningioma_bile_cervical_fibrosarcoma_prostate_epidermoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.53e-21 | 1 |
epithelial cell of cervix | 3.70e-11 | 2 |
epithelial cell of gall bladder | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.85e-20 | 9 |
biliary tree | 1.85e-20 | 9 |
biliary bud | 1.85e-20 | 9 |
bile duct | 2.49e-14 | 6 |
digestive system duct | 2.49e-14 | 6 |
uterine cervix | 4.84e-14 | 6 |
neck of organ | 4.84e-14 | 6 |
uterine epithelium | 3.70e-11 | 2 |
cervix epithelium | 3.70e-11 | 2 |
gallbladder | 8.29e-08 | 3 |
gall bladder primordium | 8.29e-08 | 3 |
epithelium of foregut-midgut junction | 8.82e-08 | 25 |
anatomical boundary | 8.82e-08 | 25 |
hepatobiliary system | 8.82e-08 | 25 |
foregut-midgut junction | 8.82e-08 | 25 |
septum transversum | 8.82e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.53e-21 | 1 |
meningioma | 1.53e-21 | 1 |
cervical cancer | 1.21e-16 | 5 |