FFCP PHASE1:Hg19::chr12:45904157..45904158,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:45904157..45904158,- | |||
|description=CAGE_peak_at_chr12:45904157..45904158,- | |description=CAGE_peak_at_chr12:45904157..45904158,- | ||
|id=chr12:45904157..45904158,- | |id=chr12:45904157..45904158,- | ||
|ontology_enrichment_celltype=CL:0000071!1.27e-07!18;CL:0002546!1.27e-07!18;CL:0000548!4.75e-07!679;CL:0000004!4.75e-07!679;CL:0000255!4.75e-07!679;CL:0000012!7.93e-07!682 | |ontology_enrichment_celltype=CL:0000071!1.27e-07!18;CL:0002546!1.27e-07!18;CL:0000548!4.75e-07!679;CL:0000004!4.75e-07!679;CL:0000255!4.75e-07!679;CL:0000012!7.93e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:1000413;1.19e-16;9!CL:0000115;1.64e-14;36!CL:0002367;1.70e-13;2!CL:0002545;4.30e-13;2!CL:0000071;9.56e-12;18!CL:0002078;3.99e-11;45!CL:0002551;7.13e-10;6!CL:0002544;1.21e-09;6!CL:0002139;1.14e-08;24!CL:0002681;3.02e-08;12!CL:0002584;3.02e-08;12!CL:0002550;2.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,4.94e-17,45;CL:1000413,2.24e-16,9;CL:0000115,4.00e-15,36;CL:0002367,7.57e-14,2;CL:0002545,4.33e-13,2;CL:0000071,1.39e-11,18;CL:0002546,1.39e-11,18;CL:0000213,1.25e-10,58;CL:0000215,1.25e-10,58;CL:0002551,9.83e-10,6;CL:0002544,1.73e-09,6;CL:0002139,1.49e-08,24;CL:0002681,4.04e-08,12;CL:0002584,4.04e-08,12;CL:0002550,1.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;9.56e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!3.36e-11!51;DOID:0060083!3.36e-11!51;DOID:1240!3.89e-09!39;DOID:162!1.64e-08!235;DOID:14566!6.15e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:12603;2.20e-07;1!DOID:2355;2.20e-07;1!DOID:5093;3.61e-07;4!DOID:1612;3.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.51e-07,1;DOID:2355,1.83e-07,1;DOID:5093,2.83e-07,4;DOID:1612,2.83e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.27e-07!18;UBERON:0004638!1.27e-07!18;UBERON:0004852!1.27e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.19e-16;9!UBERON:0004700;1.19e-16;9!UBERON:0001917;1.19e-16;9!UBERON:0005969;1.70e-13;2!UBERON:0003956;1.70e-13;2!UBERON:0005800;4.30e-13;2!UBERON:0001515;4.30e-13;2!UBERON:0004638;9.56e-12;18!UBERON:0001986;9.56e-12;18!UBERON:0004852;9.56e-12;18!UBERON:0002067;3.71e-11;9!UBERON:0006914;3.88e-11;25!UBERON:0000487;1.65e-09;22!UBERON:0001225;3.02e-08;12!UBERON:0008987;3.02e-08;12!UBERON:0000490;4.51e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,2.24e-16,9;UBERON:0004700,2.24e-16,9;UBERON:0001917,2.24e-16,9;UBERON:0005969,7.57e-14,2;UBERON:0003956,7.57e-14,2;UBERON:0005800,4.33e-13,2;UBERON:0001515,4.33e-13,2;UBERON:0004638,1.39e-11,18;UBERON:0001986,1.39e-11,18;UBERON:0004852,1.39e-11,18;UBERON:0002067,4.09e-11,9;UBERON:0004016,4.09e-11,9;UBERON:0010083,4.09e-11,9;UBERON:0006914,5.28e-11,25;UBERON:0000487,2.22e-09,22;UBERON:0001225,4.04e-08,12;UBERON:0008987,4.04e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.492484232307152,0.816002764977012,0,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0.919421224478927,3.91567694411725,0,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0,0.419499436209906,1.37559020970034,1.04497483268405,0,0,0,0.805658634218294,0,0,1.10298924103761,1.62028389576352,0,0.44905874525234,0.225222960966644,6.13266549863533,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,1.64025002283658,0,3.99330275081114,0,1.17434498643765,1.13311061057692,0.421352420106746,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0.389748020644795,0.252433774244115,0,0,0.355009592516614,0.806016785821122,0,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,1.04007436911366,1.28603687131071,0,0.799266537048298,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.697262270759755,0,0,0,0,0,0,1.35359883872224,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.647747748306418,0,0,0.501689773854853,0,0.831076008928724,1.11937377361089,0.219259876645935,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0,0,0.511359764496605,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,1.69017361519345,0,0,0.7133421029625,0,0,0,1.89736586882858,2.79947776195986,0,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,1.48642540100575,0.144269212976445,0.0711418433484141,0.797131363644112,1.1974762285969,0,0,0.324621940274555,0.280797178113459,0,0.94007937463814,0,0.169291777801603,0,1.41259795033733,0.851692475380653,0.343505344755765,0.307240764308458,0,0,0.390776190804081,1.9488432172667,0,0,0,0,0.748562161632879,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.344743373241465,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0.31396051279005,0.332423363800313,0,0,0.335643173951685,0.189753732724185,0.953619473882272,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0.411125773940253,0.993573058514948,0,0,0,0,0,0.432271251462318,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0.578742114812744,0.506827321959218,0,0.690860683462397,0,0,0,0,0,0,0,0.211312123358627,0.79994958341972,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0.523813388962845,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0,0,0,0,0,0,0.47775168788705,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.506794004045748,0,0,0,0,0,0.267964130156178,0,0,0,0,0.322944549180031,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.492484232307152,0.816002764977012,0,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0.919421224478927,3.91567694411725,0,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0,0.419499436209906,1.37559020970034,1.04497483268405,0,0,0,0.805658634218294,0,0,1.10298924103761,1.62028389576352,0,0.44905874525234,0.225222960966644,6.13266549863533,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,1.64025002283658,0,3.99330275081114,0,1.17434498643765,1.13311061057692,0.421352420106746,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0.389748020644795,0.252433774244115,0,0,0.355009592516614,0.806016785821122,0,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,1.04007436911366,1.28603687131071,0,0.799266537048298,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.697262270759755,0,0,0,0,0,0,1.35359883872224,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.647747748306418,0,0,0.501689773854853,0,0.831076008928724,1.11937377361089,0.219259876645935,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0,0,0.511359764496605,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0,1.69017361519345,0,0,0.7133421029625,0,0,0,1.89736586882858,2.79947776195986,0,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,1.48642540100575,0.144269212976445,0.0711418433484141,0.797131363644112,1.1974762285969,0,0,0.324621940274555,0.280797178113459,0,0.94007937463814,0,0.169291777801603,0,1.41259795033733,0.851692475380653,0.343505344755765,0.307240764308458,0,0,0.390776190804081,1.9488432172667,0,0,0,0,0.748562161632879,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.344743373241465,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0.31396051279005,0.332423363800313,0,0,0.335643173951685,0.189753732724185,0.953619473882272,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0.411125773940253,0.993573058514948,0,0,0,0,0,0.432271251462318,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0.578742114812744,0.506827321959218,0,0.690860683462397,0,0,0,0,0,0,0,0.211312123358627,0.79994958341972,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0.523813388962845,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0,0,0,0,0,0,0.47775168788705,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.506794004045748,0,0,0,0,0,0.267964130156178,0,0,0,0,0.322944549180031,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr12:45904157..45904158,- | |short_description=p@chr12:45904157..45904158,- | ||
}} | }} |
Latest revision as of 08:35, 24 July 2015
Short description: | p@chr12:45904157..45904158, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:45904157..45904158, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 4.94e-17 | 45 |
endothelial cell of artery | 2.24e-16 | 9 |
endothelial cell | 4.00e-15 | 36 |
trabecular meshwork cell | 7.57e-14 | 2 |
thoracic aorta endothelial cell | 4.33e-13 | 2 |
blood vessel endothelial cell | 1.39e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.39e-11 | 18 |
lining cell | 1.25e-10 | 58 |
barrier cell | 1.25e-10 | 58 |
fibroblast of dermis | 9.83e-10 | 6 |
aortic endothelial cell | 1.73e-09 | 6 |
endothelial cell of vascular tree | 1.49e-08 | 24 |
kidney cortical cell | 4.04e-08 | 12 |
renal cortical epithelial cell | 4.04e-08 | 12 |
fibroblast of the conjuctiva | 1.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 2.24e-16 | 9 |
arterial system endothelium | 2.24e-16 | 9 |
endothelium of artery | 2.24e-16 | 9 |
reticulum trabeculare | 7.57e-14 | 2 |
aqueous drainage system | 7.57e-14 | 2 |
segment of aorta | 4.33e-13 | 2 |
thoracic aorta | 4.33e-13 | 2 |
blood vessel endothelium | 1.39e-11 | 18 |
endothelium | 1.39e-11 | 18 |
cardiovascular system endothelium | 1.39e-11 | 18 |
dermis | 4.09e-11 | 9 |
dermatome | 4.09e-11 | 9 |
future dermis | 4.09e-11 | 9 |
squamous epithelium | 5.28e-11 | 25 |
simple squamous epithelium | 2.22e-09 | 22 |
cortex of kidney | 4.04e-08 | 12 |
renal parenchyma | 4.04e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.51e-07 | 1 |
anemia | 1.83e-07 | 1 |
thoracic cancer | 2.83e-07 | 4 |
breast cancer | 2.83e-07 | 4 |