FFCP PHASE1:Hg19::chr12:123717312..123717328,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:123717312..123717328,- | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr12:123717312..123717328,- | |description=CAGE_peak_at_chr12:123717312..123717328,- | ||
|id=chr12:123717312..123717328,- | |id=chr12:123717312..123717328,- | ||
|ontology_enrichment_celltype=CL:0002150!5.99e-07!3;CL:0000861!5.99e-07!3 | |ontology_enrichment_celltype=CL:0002150!5.99e-07!3;CL:0000861!5.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.83e-14;3!CL:1000428;1.83e-14;3!CL:0002559;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.09e-14,3;CL:1000428,2.09e-14,3;CL:0002559,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.83e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!2.51e-08!6;UBERON:0001049!2.64e-07!57;UBERON:0005068!2.64e-07!57;UBERON:0006241!2.64e-07!57;UBERON:0007135!2.64e-07!57;UBERON:0002616!6.38e-07!59;UBERON:0002037!9.01e-07!6;UBERON:0006215!9.01e-07!6 | |ontology_enrichment_uberon=UBERON:0000200!2.51e-08!6;UBERON:0001049!2.64e-07!57;UBERON:0005068!2.64e-07!57;UBERON:0006241!2.64e-07!57;UBERON:0007135!2.64e-07!57;UBERON:0002616!6.38e-07!59;UBERON:0002037!9.01e-07!6;UBERON:0006215!9.01e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.05e-79;2!UBERON:0005058;1.05e-79;2!UBERON:0009113;1.05e-79;2!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0002702;5.69e-21;2!UBERON:0001870;1.83e-14;3!UBERON:0000412;1.83e-14;3!UBERON:0001992;1.83e-14;3!UBERON:0002073;3.22e-09;5!UBERON:0000200;6.78e-08;6!UBERON:0002037;6.78e-08;6!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0003351,1.82e-27,6;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0002702,4.66e-21,2;UBERON:0000974,5.90e-17,10;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0001870,1.60e-14,3;UBERON:0000412,2.09e-14,3;UBERON:0001992,2.09e-14,3;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19;UBERON:0002073,3.49e-09,5;UBERON:0005086,3.49e-09,5;UBERON:0000200,6.34e-08,6;UBERON:0002037,6.78e-08,6;UBERON:0006215,6.78e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.552896299656123,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.219267951258557,0.246346371159628,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0.455324382702595,0,0.115233987555779,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,2.38978966393223,3.72448285775147,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p@chr12:123717312..123717328,- | |short_description=p@chr12:123717312..123717328,- | ||
}} | }} |
Latest revision as of 06:14, 24 July 2015
Short description: | p@chr12:123717312..123717328, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123717312..123717328, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.09e-14 | 3 |
stem cell of epidermis | 2.09e-14 | 3 |
hair follicle cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.48e-40 | 4 |
hemolymphoid system gland | 1.48e-40 | 4 |
thymic region | 1.48e-40 | 4 |
pharyngeal gland | 1.48e-40 | 4 |
thymus primordium | 1.48e-40 | 4 |
pharyngeal epithelium | 1.82e-27 | 6 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
middle frontal gyrus | 4.66e-21 | 2 |
neck | 5.90e-17 | 10 |
gland of gut | 5.90e-17 | 10 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
frontal cortex | 1.60e-14 | 3 |
dermal papilla | 2.09e-14 | 3 |
papillary layer of dermis | 2.09e-14 | 3 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |
hair follicle | 3.49e-09 | 5 |
hair follicle placode | 3.49e-09 | 5 |
gyrus | 6.34e-08 | 6 |
cerebellum | 6.78e-08 | 6 |
rhombic lip | 6.78e-08 | 6 |