FFCP PHASE1:Hg19::chr11:62300117..62300140,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:62300117..62300140,- | |||
|description=CAGE_peak_at_chr11:62300117..62300140,- | |||
|id=chr11:62300117..62300140,- | |||
|ontology_enrichment_celltype=CL:0000057!6.76e-11!75;CL:0002057!3.33e-10!42;CL:0000860!5.06e-10!45;CL:0002009!7.55e-08!65;CL:0002194!1.43e-07!63;CL:0000576!1.43e-07!63;CL:0000040!1.43e-07!63;CL:0000559!1.43e-07!63;CL:0000557!2.46e-07!71;CL:0002320!3.29e-07!365;CL:0002620!4.28e-07!23;CL:0000134!5.96e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-10;33!CL:0002057;3.98e-10;33!CL:0000473;2.57e-09;39!CL:0000234;2.57e-09;39!CL:0002620;8.73e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.89e-11,76;CL:0000473,2.01e-11,48;CL:0000234,2.01e-11,48;CL:0000860,9.79e-11,42;CL:0002057,9.79e-11,42;CL:0002009,1.24e-08,61;CL:0002194,2.49e-08,59;CL:0000576,2.49e-08,59;CL:0000040,2.49e-08,59;CL:0000559,2.49e-08,59;CL:0002320,3.04e-08,361;CL:0000134,6.19e-08,354;CL:0000557,6.22e-08,67;CL:0002620,8.53e-08,23;CL:0000839,2.94e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.51e-10!95;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0002384!6.40e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.93e-12,315;UBERON:0004120,1.93e-12,315;UBERON:0006603,1.93e-12,315;UBERON:0003102,3.30e-10,99;UBERON:0002384,5.07e-08,371;UBERON:0001434,5.22e-08,100;UBERON:0002199,3.16e-07,46;UBERON:0002416,3.16e-07,46;UBERON:0002371,3.52e-07,76;UBERON:0002097,6.02e-07,41;UBERON:0004923,8.68e-07,66 | |||
|phase1_expression=2.36181893051724,21.8382534368803,2.11431606143957,9.00659685178174,5.81049422755474,2.61701557230111,0,1.89515962028049,2.08948502559871,0,2.09340350391728,1.96597234917155,1.05506791291381,1.8564952944007,3.64537113300707,4.03395087871065,4.82155622419182,2.19093027116212,1.95173119516203,0.246242116153576,1.63200552995402,1.25381888591235,0,2.6006140763848,1.38096903554283,0.687720651731561,0.164201178899891,0.629686250509434,0.786728553697808,1.53531759238885,0.928896739896456,0,0.90361775633475,2.58827807116751,0,0,0,1.10799081706375,9.82667792603694,3.68918480216948,1.56740831967947,1.29557466407592,0.257575567634187,14.5398238779565,3.02300754951048,3.63876091781724,16.0376035464922,5.75635043230556,4.33588919253145,11.2200033005639,3.07392847834921,2.12834006899727,6.55016793399575,5.16387746867061,2.70852973188684,12.2357520702693,6.82265375144614,2.02251136000576,13.1616073719488,1.60464513538047,7.67204550958849,9.56568770541477,3.59034583718937,4.26224750532694,26.6992499538297,5.10646702222026,1.86846674698672,8.29120595347253,10.429658368404,2.82345498116652,9.6863920421339,1.47311054395026,2.21523671208619,0.633765858935825,1.70083439972035,2.30624510059213,1.79725809834392,1.05123824989054,1.44653028027372,3.70516566863623,1.79025009479181,1.27864907635244,0,1.63841583378639,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0,1.70763890732835,1.76171156811282,1.52909291250092,1.32171328579026,0.560508562981536,0,1.180258620683,12.9693551707224,6.16804496998528,0.334372990781356,2.28145586643513,1.4203434172042,0,1.33692548262208,1.76763544484902,2.65840673500345,1.62482318259009,1.5370958367081,0.520237390239513,0.164437904603676,0,0,0.296573126324121,0,0,0.793165398882963,3.44898444241729,2.06176467289578,1.51811815211702,0.95569624297229,1.95325036156926,0.950452044448374,2.10805166708882,1.79181255616186,2.49861453104692,1.65744076430812,0.821127996921047,1.41124720257313,12.0348088102578,3.47578569318718,2.43806866313962,0.670700859703636,0.639312809217652,3.97583067623023,0.50133791063589,6.80778639115871,0.795285947051099,0.973269740605272,1.32348744029695,7.31707011626461,2.81071314218003,1.37528029272598,0,1.85392221392215,1.62273696827342,1.21890816109487,5.31831842075461,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,3.35599548967925,11.5549577614828,0.208994966536811,1.55050055501597,1.06729878806013,1.00416183829401,3.62546385398232,0,4.88124115096339,1.10298924103761,8.91156142669936,1.69669483739752,0.22452937262617,0.450445921933289,0,2.84779697870439,2.01521918323448,0,0,0.436094052142534,2.48485975847659,2.5326102332916,1.45650098894541,16.3496873826824,7.4480360261655,3.92474320099615,0,4.9333509683432,0.933633106199299,3.3677668017422,3.92308567472301,0.756787138224657,2.30470369792,0,4.99456122928513,1.1409436430889,9.41526687476347,5.28455243896942,3.72307772046703,3.79217178096071,2.04154171254893,11.1779228753709,4.44300859055791,2.37600571456411,11.1270118175351,0,0.718618141816238,2.69337782326506,6.38104451347017,0.831192346452549,4.38977620880838,9.50112166976961,2.40380894250555,0.907457465280168,29.0611209815956,4.05759038755278,3.39091041855299,14.7044637081357,6.38925681278321,12.6243864622358,3.90845398296339,3.37552664482532,4.96928726322113,17.4179304228439,1.93304787148829,7.92065678412178,17.3954700333141,3.02256294682921,2.88253006927829,2.51239109112286,2.72746120590835,0.860413786167011,0.365921118388786,0.132529768321485,0.813357600086629,0.310983165046111,0,0,1.56449532329816,11.5783368874719,2.76269842704961,6.50115099244771,10.8281922250438,0.473227200159376,0.505754070234305,0.482022059766964,1.43382164552112,0.435758888184812,1.18635309555548,0.539325232640658,0.588664395376038,1.15424147083917,1.4763109092493,0,0,5.88034845542168,1.26755034821831,0.982827216677626,0,0.441463099414651,0.614942192715568,1.54411029268673,4.17051084552777,0,3.51851403440708,2.59247646443883,0,2.07986957055916,1.44331342025273,0.115930404975077,0.469634776943287,1.58803092537181,1.38895653772983,1.33177906564219,3.1608175918371,1.71697232418975,1.23108503043699,0,3.86441021950693,0,2.35174979478403,1.27597587518148,1.43293636324557,4.35950907770943,2.68367875415648,0.985326475791887,1.58487181223807,2.28060927094849,1.00883967391873,3.1560608356595,0.507983154337352,0.763976851116555,1.17217447210047,5.13217338068116,2.26220483947312,1.8020583470635,2.28661146104463,0.784917590417525,1.74384027533312,1.39342743059805,0.646358578788889,0,1.690605505112,2.12750493267896,4.16029747645464,0.257207374262142,0,1.8649552531127,1.28680194292333,0.542621605391443,0.823240336780769,0.977208552881205,0,0.791951872933429,0.904318131178758,0.871533458600294,7.29802835629016,4.86495122564762,4.52031382288914,12.6500363689819,2.63587341040741,4.59447743336456,0,4.05387658669222,8.6300055471161,0.895304816199478,1.34502172792233,1.77327684181734,7.11570997036407,4.49200626979119,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0,3.18997878469764,2.50085260529839,3.25518028439683,7.69492187663986,20.6977627004708,6.93890626149313,5.38850508966481,0.601892199455438,2.27407504055985,2.0694614258501,1.99267679560631,1.29058417979192,5.03924963914881,0.587403472388222,0,2.06768026122887,6.25571182373989,3.73546452312055,2.72814814301633,6.65741758041988,8.16453791990137,3.2254015016441,4.60385919864187,11.507063871756,3.71603532841533,3.58195074346692,3.21707842287215,1.48418066444991,11.2573076475939,2.84098760501003,1.31403449622095,15.058378446325,8.25093687065711,0.846016147141356,10.0253235151642,6.81399318125633,1.95184561879831,6.91946438425525,5.11385218341754,0.451199612907412,1.5403067420883,0,2.92278449306521,0.316654886678627,2.27466768141793,2.55140557914773,2.59099099322567,1.54227252690289,0.812839312631559,2.50844886927427,0.509752546090077,1.66215201785745,1.56712328305525,0,0,0.512900250232778,0.328014645699706,0.650756789328606,1.23649213977267,2.47237555009527,0.330037999682352,0.574265537996172,7.15066270640173,1.6068392984416,0.676695028044854,4.77550713055398,3.22357716924872,3.1702411671442,3.33002759091648,8.41096824702525,3.40906509664404,1.24644849905432,3.30569830721956,4.22818148203234,2.04180339991335,3.13589120652205,0.929691098594572,7.55549632393536,0,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0.744316738719335,0.316379424718726,2.85945290885737,0.255897791311334,3.42351190427136,0.636406495851874,0.78494864019923,1.61885211824983,6.86342574340137,2.47406044925942,0,3.17020642346017,0.421258456238981,0,0.974853958525138,4.22600587027022,0.545999645631943,6.78746073377821,2.26016233240486,0,5.30751180192976,1.31535265576129,0,5.24715801637306,0,2.16876448669825,0.281695602532241,0.430234056612155,0.785992328104969,0.7133421029625,1.41904425628239,9.28873595309722,17.4526293268748,0,0,0.577332676353072,1.34060455107157,1.08890984861323,1.31801321087491,0,1.68471475667626,0.886860307073351,1.1486170010348,0,1.52927441428475,5.12682468456746,1.19115887728894,1.23408681925858,1.29694662238543,0,6.34500141035416,1.6023610669121,0.962479855263359,0.245040215981032,0.743212700502875,0,0,0.637705090915289,0.798317485731266,0,0,0,0.280797178113459,0,0,0,0,1.2847046008296,2.21979677910152,0.425846237690326,0.343505344755765,0.307240764308458,0,0.500547425135725,0.390776190804081,0,0,0,0,0,0.561421621224659,6.00683535014765,0.121360521749513,1.00299045849731,1.98895302764489,9.07229042003222,3.8605408508243,22.1155705511447,1.9882952955326,2.11004124615769,0.890469640183247,0,0,7.96991953004279,1.65770349318689,0,0.511343412510774,0.123084805461069,4.0435146396035,0.629078458031288,0.716084698702437,0,4.53759665929895,4.7896618469388,0,0,0.927680981618513,1.99613798001194,1.04171104434093,0.0874599999961957,6.52499617891314,1.593108275997,1.27126825146383,0.709163045303809,0,0.874813840149763,0.347249989866585,0,1.80894657938112,0,2.21158519862449,0.591095237907095,0.658156191461918,0.21787692703798,0.975966209950223,4.77091602723542,0.227884111694002,0.23056390438806,1.43612231055635,2.39024218228418,8.93203247249374,1.00757352742049,9.06159119231679,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0.503464760927528,0,0.158936578980379,7.17393419395292,0.979396848954886,0.424059214301822,0,3.98104772431402,0.707660516026713,1.22206028986725,0,0.123563938946503,0.104421949505455,0.471807930864739,2.40773294189637,0.234264445725339,0,0,2.18502341580683,1.18375320854817,3.62972148145992,0.61214552326098,1.13735843331278,0,0,0.664653872707185,0.992975867626496,0,0,0.284609546029793,2.4961441142365,6.76882979507011,0.391969589657511,0.435296032902013,4.71762004253481,1.71986032471617,1.74161396320353,1.38869702463753,1.97077096927702,6.69224213770094,0.264768380074501,4.29363407483012,1.23337732182076,0.397429223405979,0.316553979779393,1.17330829640882,0.0801588202515337,4.26905989478705,10.3900996982708,0.432271251462318,0,0.171594997861965,0.864328787928898,1.24252535565433,1.88555227693436,1.9026588850306,1.46443984837266,1.52997326454483,0.866851769704557,0,1.36905378891993,0,1.71906176567983,0.788662062837943,4.46851842035607,4.58320848023367,2.87149209830726,5.39133301347276,12.8767814440971,1.11585728720936,0.873385142327441,0.720599767084807,0,0.0787831823072236,0.659326867049332,0.808842526250219,0.393709926058995,0,0,3.26888174667781,0,0,0,2.249738915515,3.0952078182318,0.0607495566580247,0.335434687599266,0.788057072991982,0.419636705079985,0.422401346077626,1.07572403599707,0.575745591958336,4.2881719582402,0.662091970365432,0,12.4889908403354,11.2348793856165,12.0837323240481,0,0.410462603746695,2.04465626142506,1.47305718976163,0.293104467356165,0,0.129282956361551,1.05786081394152,0.342173675768659,0,1.17466153824464,0.628817220398664,4.97086866416635,2.97699613087171,1.18566979138767,0,0.638341257770182,0,0.7520696820681,1.22538230705385,1.63936315354902,0,0,1.83039397352945,1.752673029891,2.29363678276028,1.55300672151593,0.248385611765534,1.66018361923477,0.37494122388632,0.151649117541648,1.99825733481477,4.9405822136616,0,0.144921028610825,3.13435086062435,3.03827302801392,4.99325275352352,2.65164207385125,4.0250864280412,5.33886732957922,2.05956061557231,4.53692771289717,2.02068360757615,0.443565449968902,4.14171594625626,0,1.55262956876259,7.4647117411354,5.84851772027589,5.21745061811734,1.50257608997218,9.13932509205109,5.69619026486526,1.63663793282303,3.22231671127465,2.32016879939247,5.57334244178062,6.0004164699473,8.24149692438703,3.36749488765919,1.26184898228651,0.963099152036517,0.428883182749851,1.04397716786085,6.34776591434363,3.47283711485751,5.87368090815522,5.01448755028165,3.08801447160972,2.85069264452319,6.71418754594348,3.08662461233464,4.22356101632682,1.79369063011563,1.0362910251936,1.51929978088691,0.691292180758654,2.92290463259083,0.664324201566815,1.14495775979091,2.29326894192489,2.70350199629091,0.845248493434508,1.19992437512958,0.213383459388282,1.37771983728653,0,1.10463570151104,0.279759015438889,0.622077260032973,0,0,0,0.109209638192014,0.169732529954025,0,0.619678821295011,0,0.636008701306837,0,0,2.46873160583479,10.1061007526556,0.256916900385838,1.41696576325585,1.11743701340006,0,0.252071696221718,0.138314504928436,1.77623210195036,0,1.76665893301846,0,8.80457272904059,2.19498765685643,2.288292572803,0,0.397832444232549,2.03067886542995,1.81534561833168,2.34454203369928,0.785720083444267,21.1265773588025,0.739280431085226,0.135075169236789,0.781078098613847,1.03343398250592,0.19024743058172,0,1.64477330057155,15.8787577084574,0.703484977438482,2.04419884223352,0,0,0.606965604236632,0,2.04015451374069,0,0.171488009437418,0.0679697329768317,0.263091094251396,0.945550727071746,0.778619813244484,1.56986185701028,0.314231179832004,1.12108865325516,2.73947616152849,1.72742072974897,4.7775168788705,0.929195074296532,0,1.04617282831313,0.347716544605159,0.801711364730253,8.91029505901058,14.6817890300797,4.83881763269864,0.860454717640555,1.41998400876678,0.340853619036631,1.69354820076372,6.4149923192334,2.17144469965024,1.91107787795487,1.4541206133713,0.098150233615243,0.243835849964539,1.94228651156368,0.821302454849976,2.3196288626764,7.77137588894623,0,0.397901550322736,0.83244063544298,0,0.109940516745429,0,1.00326405540328,1.96703604453562,0,10.0510811919101,0,1.37415926980462,0.297046400327086,2.9585900930838,1.35941691750254,0.187967835959707,0.257831551894309,0.499705779624645,0.178553938605658,2.47026410200984,1.36410323371586,0,2.75237570042724,2.58011249672612,0.157771562193185,0.271965960763659,0,3.7031878836078,10.415860508669,6.47045880083986,10.8156640530947,0,0,0.633492505057185,0.509944148709909,0,0.735159196278759,1.25353769646188,1.81868875723775,4.01946195234268,0,1.65492793379032,5.33084954752452,4.28515976634733,0.129177819672012,0.0620747142958579,1.90624166387043,0.636471582781649,1.61693751166575,12.1921378822298,4.44903291410865,1.01028079521881,1.72133292942423,3.32660356546013,0.0814032686109745,0.853818767021724,0,0.359300808426348,2.34640942403454,2.81155321620593,4.88275413978886,1.99727032255654,4.22674966541155,0 | |||
|short_description=p@chr11:62300117..62300140,- | |||
}} |
Latest revision as of 23:39, 23 July 2015
Short description: | p@chr11:62300117..62300140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62300117..62300140, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.89e-11 | 76 |
defensive cell | 2.01e-11 | 48 |
phagocyte | 2.01e-11 | 48 |
classical monocyte | 9.79e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.79e-11 | 42 |
macrophage dendritic cell progenitor | 1.24e-08 | 61 |
monopoietic cell | 2.49e-08 | 59 |
monocyte | 2.49e-08 | 59 |
monoblast | 2.49e-08 | 59 |
promonocyte | 2.49e-08 | 59 |
connective tissue cell | 3.04e-08 | 361 |
mesenchymal cell | 6.19e-08 | 354 |
granulocyte monocyte progenitor cell | 6.22e-08 | 67 |
skin fibroblast | 8.53e-08 | 23 |
myeloid lineage restricted progenitor cell | 2.94e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.93e-12 | 315 |
mesoderm-derived structure | 1.93e-12 | 315 |
presumptive mesoderm | 1.93e-12 | 315 |
surface structure | 3.30e-10 | 99 |
connective tissue | 5.07e-08 | 371 |
skeletal system | 5.22e-08 | 100 |
integument | 3.16e-07 | 46 |
integumental system | 3.16e-07 | 46 |
bone marrow | 3.52e-07 | 76 |
skin of body | 6.02e-07 | 41 |
organ component layer | 8.68e-07 | 66 |