FFCP PHASE1:Hg19::chr11:621862..621873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:621862..621873,- | |||
|coexpression_cluster_id=C1345 | |||
|description=CAGE_peak_at_chr11:621862..621873,- | |description=CAGE_peak_at_chr11:621862..621873,- | ||
|id=chr11:621862..621873,- | |id=chr11:621862..621873,- | ||
|ontology_enrichment_celltype=CL:0002535!7.52e-08!2 | |ontology_enrichment_celltype=CL:0002535!7.52e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.13e-10;12!CL:0002563;2.03e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.03e-10,12;CL:0002563,2.26e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!8.04e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.43e-17!27;UBERON:0001154!1.84e-14!1;UBERON:0001153!1.84e-14!1;UBERON:0005409!3.71e-13!35;UBERON:0009854!1.48e-09!23;UBERON:0004921!3.55e-09!129;UBERON:0004185!3.55e-09!129;UBERON:0002108!1.00e-08!14;UBERON:0009856!1.77e-08!26;UBERON:0006955!7.52e-08!2;UBERON:0004801!7.52e-08!2;UBERON:0001007!1.92e-07!155;UBERON:0001555!1.92e-07!155;UBERON:0007026!1.92e-07!155;UBERON:0002107!6.24e-07!19;UBERON:0006925!6.24e-07!19;UBERON:0008836!6.24e-07!19;UBERON:0001155!7.64e-07!9;UBERON:0004119!9.95e-07!169;UBERON:0000925!9.95e-07!169;UBERON:0006595!9.95e-07!169 | |ontology_enrichment_uberon=UBERON:0000160!5.43e-17!27;UBERON:0001154!1.84e-14!1;UBERON:0001153!1.84e-14!1;UBERON:0005409!3.71e-13!35;UBERON:0009854!1.48e-09!23;UBERON:0004921!3.55e-09!129;UBERON:0004185!3.55e-09!129;UBERON:0002108!1.00e-08!14;UBERON:0009856!1.77e-08!26;UBERON:0006955!7.52e-08!2;UBERON:0004801!7.52e-08!2;UBERON:0001007!1.92e-07!155;UBERON:0001555!1.92e-07!155;UBERON:0007026!1.92e-07!155;UBERON:0002107!6.24e-07!19;UBERON:0006925!6.24e-07!19;UBERON:0008836!6.24e-07!19;UBERON:0001155!7.64e-07!9;UBERON:0004119!9.95e-07!169;UBERON:0000925!9.95e-07!169;UBERON:0006595!9.95e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.73e-51;4!UBERON:0000160;1.86e-39;17!UBERON:0005409;5.23e-31;22!UBERON:0004921;2.67e-18;33!UBERON:0001007;8.88e-11;81!UBERON:0002114;1.14e-10;2!UBERON:0001555;7.18e-09;54!UBERON:0001242;2.03e-08;4!UBERON:0001262;2.03e-08;4!UBERON:0004786;2.03e-08;4!UBERON:0004808;2.03e-08;4!UBERON:0001277;2.03e-08;4!UBERON:0002107;6.57e-07;19!UBERON:0006925;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.30e-51,4;UBERON:0000160,2.02e-39,17;UBERON:0005409,1.81e-27,25;UBERON:0004921,7.31e-12,118;UBERON:0002114,1.20e-10,2;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0001242,2.26e-08,4;UBERON:0001262,2.26e-08,4;UBERON:0004786,2.26e-08,4;UBERON:0004808,2.26e-08,4;UBERON:0001277,2.26e-08,4;UBERON:0002107,6.38e-07,19;UBERON:0006925,6.38e-07,19;UBERON:0008836,6.38e-07,19 | |||
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|short_description=p@chr11:621862..621873,- | |short_description=p@chr11:621862..621873,- | ||
}} | }} |
Latest revision as of 23:38, 23 July 2015
Short description: | p@chr11:621862..621873, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:621862..621873, - |
Coexpression cluster: | C1345_Intestinal_Hepatocyte_small_testis_colon_Prostate_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.03e-10 | 12 |
intestinal epithelial cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.30e-51 | 4 |
intestine | 2.02e-39 | 17 |
gastrointestinal system | 1.81e-27 | 25 |
subdivision of digestive tract | 7.31e-12 | 118 |
duodenum | 1.20e-10 | 2 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
intestinal mucosa | 2.26e-08 | 4 |
wall of intestine | 2.26e-08 | 4 |
gastrointestinal system mucosa | 2.26e-08 | 4 |
gastrointestinal system epithelium | 2.26e-08 | 4 |
intestinal epithelium | 2.26e-08 | 4 |
liver | 6.38e-07 | 19 |
digestive gland | 6.38e-07 | 19 |
liver bud | 6.38e-07 | 19 |