FFCP PHASE1:Hg19::chr11:2159814..2159825,+: Difference between revisions
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|id=chr11:2159814..2159825,+
|short_description=p14@BC017277
|description=CAGE_peak_14_at_BC017277_5end
|association_with_transcript=-189bp_to_BC017277_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_BC017277_5end | |||
|cluster_id=chr11:2159814..2159825,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_14_at_BC017277_5end | |||
|id=chr11:2159814..2159825,+ | |||
|ontology_enrichment_celltype=CL:0000349!3.43e-07!3;CL:0002577!3.43e-07!3;CL:0002541!8.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.11e-34;19!CL:0002577;3.99e-17;3!CL:0002536;3.00e-12;2!CL:0002575;3.35e-12;2!CL:0002537;6.91e-11;5!CL:0002541;8.34e-09;3!CL:0000182;2.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.89e-34,19;CL:0002577,2.95e-17,3;CL:0002536,2.84e-12,2;CL:0002575,3.35e-12,2;CL:0002537,7.14e-11,5;CL:0002541,8.35e-09,3;CL:0000182,2.18e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.88e-12;11!UBERON:0009497;2.41e-10;13!UBERON:0003104;1.41e-07;31!UBERON:0000358;4.83e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.09e-19!14;UBERON:0000158!1.09e-19!14;UBERON:0000478!2.37e-16!24;UBERON:0003124!4.10e-14!7;UBERON:0001987!5.72e-09!4;UBERON:0004340!5.72e-09!4;UBERON:0000305!9.23e-08!7;UBERON:0000476!8.29e-07!3;UBERON:0000920!8.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.01e-37;24!UBERON:0005631;3.01e-27;10!UBERON:0000158;3.01e-27;10!UBERON:0001987;3.91e-22;4!UBERON:0000305;3.75e-20;7!UBERON:0003124;8.34e-09;3!UBERON:0000920;8.34e-09;3!UBERON:0002107;5.39e-07;19!UBERON:0006925;5.39e-07;19!UBERON:0002426;6.99e-07;1!UBERON:0003831;6.99e-07;1!UBERON:0003898;6.99e-07;1!UBERON:0004830;6.99e-07;1!UBERON:0003830;6.99e-07;1!UBERON:0005175;6.99e-07;1!UBERON:0001774;6.99e-07;1!UBERON:0001103;6.99e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.52e-46,14;UBERON:0000158,1.52e-46,14;UBERON:0000478,5.68e-37,24;UBERON:0003124,2.17e-28,7;UBERON:0001987,3.32e-22,4;UBERON:0004340,3.32e-22,4;UBERON:0000305,3.75e-20,7;UBERON:0004871,1.31e-17,8;UBERON:0004923,8.16e-10,66;UBERON:0000920,8.35e-09,3;UBERON:0002107,5.04e-07,19;UBERON:0006925,5.04e-07,19;UBERON:0008836,5.04e-07,19;UBERON:0002426,7.39e-07,1;UBERON:0003831,7.39e-07,1;UBERON:0003898,7.39e-07,1;UBERON:0004830,7.39e-07,1;UBERON:0003830,7.39e-07,1;UBERON:0005175,7.39e-07,1;UBERON:0001774,7.39e-07,1;UBERON:0001103,7.39e-07,1;UBERON:0010084,7.39e-07,1 | |||
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| ||
|short_description=p14@BC017277 | |||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p14@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -189bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.89e-34 | 19 |
placental epithelial cell | 2.95e-17 | 3 |
amniotic epithelial cell | 2.84e-12 | 2 |
central nervous system pericyte | 3.35e-12 | 2 |
amnion mesenchymal stem cell | 7.14e-11 | 5 |
chorionic membrane mesenchymal stem cell | 8.35e-09 | 3 |
hepatocyte | 2.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.52e-46 | 14 |
membranous layer | 1.52e-46 | 14 |
extraembryonic structure | 5.68e-37 | 24 |
chorion | 2.17e-28 | 7 |
placenta | 3.32e-22 | 4 |
allantois | 3.32e-22 | 4 |
amnion | 3.75e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.31e-17 | 8 |
organ component layer | 8.16e-10 | 66 |
egg chorion | 8.35e-09 | 3 |
liver | 5.04e-07 | 19 |
digestive gland | 5.04e-07 | 19 |
liver bud | 5.04e-07 | 19 |
chest muscle | 7.39e-07 | 1 |
respiratory system muscle | 7.39e-07 | 1 |
skeletal muscle of trunk | 7.39e-07 | 1 |
respiratory system skeletal muscle | 7.39e-07 | 1 |
thoracic segment muscle | 7.39e-07 | 1 |
chest organ | 7.39e-07 | 1 |
muscle of trunk | 7.39e-07 | 1 |
diaphragm | 7.39e-07 | 1 |
future diaphragm | 7.39e-07 | 1 |