FFCP PHASE1:Hg19::chr11:2159607..2159615,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_X06260_5end | |association_with_transcript=13bp_to_X06260_5end | ||
|cluster_id=chr11:2159607..2159615,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_1_at_X06260_5end | |description=CAGE_peak_1_at_X06260_5end | ||
|id=chr11:2159607..2159615,- | |id=chr11:2159607..2159615,- | ||
|ontology_enrichment_celltype=CL:0002541!7.10e-07!3 | |ontology_enrichment_celltype=CL:0002541!7.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.34e-37;19!CL:0002541;7.55e-23;3!CL:0002575;4.44e-15;2!CL:0002537;5.82e-14;5!CL:0002577;1.74e-10;3!CL:0000669;5.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.11e-37,19;CL:0002541,8.13e-23,3;CL:0002575,4.61e-15,2;CL:0002537,5.83e-14,5;CL:0002577,1.62e-10,3;CL:0000669,5.62e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.59e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;2.04e-35;10!UBERON:0000158;2.04e-35;10!UBERON:0000478;6.15e-35;24!UBERON:0003124;7.55e-23;3!UBERON:0000920;7.55e-23;3!UBERON:0000305;3.72e-17;7!UBERON:0001987;1.09e-16;4!UBERON:0002426;1.59e-08;1!UBERON:0003831;1.59e-08;1!UBERON:0003898;1.59e-08;1!UBERON:0004830;1.59e-08;1!UBERON:0003830;1.59e-08;1!UBERON:0005175;1.59e-08;1!UBERON:0001774;1.59e-08;1!UBERON:0001103;1.59e-08;1!UBERON:0001301;2.95e-08;1 | |||
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| ||
|short_description=p1@X06260 | |short_description=p1@X06260 | ||
}} | }} |
Latest revision as of 21:02, 23 July 2015
Short description: | p1@X06260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_X06260_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 13bp_to_X06260_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.11e-37 | 19 |
chorionic membrane mesenchymal stem cell | 8.13e-23 | 3 |
central nervous system pericyte | 4.61e-15 | 2 |
amnion mesenchymal stem cell | 5.83e-14 | 5 |
placental epithelial cell | 1.62e-10 | 3 |
pericyte cell | 5.62e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.09e-50 | 14 |
membranous layer | 2.09e-50 | 14 |
chorion | 7.85e-37 | 7 |
extraembryonic structure | 6.36e-35 | 24 |
egg chorion | 8.13e-23 | 3 |
amnion | 3.72e-17 | 7 |
placenta | 1.12e-16 | 4 |
allantois | 1.12e-16 | 4 |
somatic layer of lateral plate mesoderm | 4.91e-15 | 8 |
organ component layer | 2.24e-11 | 66 |
chest muscle | 1.59e-08 | 1 |
respiratory system muscle | 1.59e-08 | 1 |
skeletal muscle of trunk | 1.59e-08 | 1 |
respiratory system skeletal muscle | 1.59e-08 | 1 |
thoracic segment muscle | 1.59e-08 | 1 |
chest organ | 1.59e-08 | 1 |
muscle of trunk | 1.59e-08 | 1 |
diaphragm | 1.59e-08 | 1 |
future diaphragm | 1.59e-08 | 1 |
epididymis | 3.53e-08 | 1 |