FFCP PHASE1:Hg19::chr11:2017849..2017895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2017849..2017895,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_at_chr11:2017849..2017895,+ | |description=CAGE_peak_at_chr11:2017849..2017895,+ | ||
|id=chr11:2017849..2017895,+ | |id=chr11:2017849..2017895,+ | ||
|ontology_enrichment_celltype=CL:0000188!4.89e-08!9 | |ontology_enrichment_celltype=CL:0000188!4.89e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.87e-15;19!CL:0002577;3.29e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.94e-15,19;CL:0002577,3.34e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.20e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.51e-14!14;UBERON:0000158!1.51e-14!14;UBERON:0001737!1.94e-13!9;UBERON:0001557!1.93e-12!19;UBERON:0003124!6.99e-11!7;UBERON:0000478!5.85e-10!24;UBERON:0003104!9.87e-08!238;UBERON:0009142!9.87e-08!238;UBERON:0000481!2.02e-07!347;UBERON:0000064!3.05e-07!219;UBERON:0001987!3.98e-07!4;UBERON:0004340!3.98e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.62e-22;9!UBERON:0001557;1.62e-22;9!UBERON:0000478;1.84e-16;24!UBERON:0005631;1.01e-12;10!UBERON:0000158;1.01e-12;10!UBERON:0001987;2.23e-11;4!UBERON:0000305;1.22e-09;7!UBERON:0001134;2.16e-08;16!UBERON:0002036;2.16e-08;16!UBERON:0001723;2.61e-08;3!UBERON:0001033;2.61e-08;3!UBERON:0000922;4.79e-08;49!UBERON:0000072;1.35e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.56e-22,9;UBERON:0005631,1.05e-21,14;UBERON:0000158,1.05e-21,14;UBERON:0001557,2.76e-17,19;UBERON:0000478,1.85e-16,24;UBERON:0003124,5.81e-14,7;UBERON:0001987,2.16e-11,4;UBERON:0004340,2.16e-11,4;UBERON:0000072,8.83e-10,47;UBERON:0000305,1.26e-09,7;UBERON:0001041,5.66e-09,87;UBERON:0004871,2.34e-08,8;UBERON:0001723,2.40e-08,3;UBERON:0001033,2.40e-08,3;UBERON:0010056,2.40e-08,3;UBERON:0004119,4.63e-08,160;UBERON:0000925,4.63e-08,160;UBERON:0006595,4.63e-08,160;UBERON:0000065,5.22e-08,54;UBERON:0004921,3.70e-07,118;UBERON:0008947,6.08e-07,38;UBERON:0003258,6.08e-07,38 | |||
|phase1_expression=0.54503513781167,0,0,0,0,6.10636966870258,0,0,0.261185628199839,0.245733936501509,0.697801167972428,8.73765488520689,11.8695140202804,0.866364470720326,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,0,0,0.144846518960824,0,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,6.33793516927999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51052125730374,0.414644220061482,1.00928340350251,0,0,0,0,0,0,8.87301000298829,10.1150814046861,7.71235295627142,9.0441057640563,8.71517776369625,6.40630671599961,9.03369764673102,9.41863032601661,11.9271618653381,0.738155454624648,2.80483547606892,1.6462960453256,5.88034845542168,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,4.53683381276795,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00084595560703,32.5572963234866,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,1.15825045334063,2.4657158706046,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0,1.62759014219841,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,7.83204629850962,12.01001983338,0,0,0,14.2469958579742,23.3009615314696,24.7960040530338,0,0,1.40330047216537,0.384417447767103,0,0.321707842287215,4.45254199334973,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.854738209659,0,0.082509499920588,0,0,0,2.03008508413456,0.462145851343933,1.22802939780904,0.827019434907183,0.214840489736547,0.435050081742686,0.93749290157711,10.505780206315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,2.56763392820352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,2.16147890228867,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,1.69458841398202,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,18.3833253248021,8.01804638248124,32.8661951246178,0,0,0,0,0,0,0,2.26739473068848,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,1.88491053260521,1.62971057883012,18.8210684241832,0.824378340616761,37.8454690973231,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,19.2618635351709,0,0,0,0,0.789168805698781,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.387956065953678,0,1.80784592624426,0,0,0,0,0,0,14.5861014994955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.858452096273142,0,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.31136470337495,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,13.2506888912221,0,0,0,0,0,0.471612915298998,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,1.31051565830417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0.733714394086716,8.43337362897469,0,0,0,0.0752103283492573,0,0,12.3096146406269,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,4.7899279887825,0,0,0,0.131545547125698,0,0,0.549451649953598,0,0.560544326627578,4.56579360254748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.84793052341245,2.3196288626764,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,1.74847648403166,0,0.245148321753905,0,0,0,1.2679671827502,0,0,1.61144719933943,0,0.178553938605658,0,0,0,0,0,0,0,0,2.1161073620616,0.371995018166751,0.462175628631418,10.3830374909709,0,0.109265571963696,0.253397002022874,0,0,0,0,0.227336094654718,0,0,0,1.0661699095049,4.04709533488359,0,0.124149428591716,0,0.0636471582781649,2.82964064541507,1.52401723527873,22.5873978716285,0.5388164241167,0,2.66128285236811,0,0,0,0,18.7712753922763,0.122241444182866,1.22068853494722,0,0.201273793591026,0 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| ||
|short_description=p@chr11:2017849..2017895,+ | |short_description=p@chr11:2017849..2017895,+ | ||
}} | }} |
Latest revision as of 20:55, 23 July 2015
Short description: | p@chr11:2017849..2017895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2017849..2017895, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.94e-15 | 19 |
placental epithelial cell | 3.34e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.56e-22 | 9 |
extraembryonic membrane | 1.05e-21 | 14 |
membranous layer | 1.05e-21 | 14 |
upper respiratory tract | 2.76e-17 | 19 |
extraembryonic structure | 1.85e-16 | 24 |
chorion | 5.81e-14 | 7 |
placenta | 2.16e-11 | 4 |
allantois | 2.16e-11 | 4 |
segment of respiratory tract | 8.83e-10 | 47 |
amnion | 1.26e-09 | 7 |
foregut | 5.66e-09 | 87 |
somatic layer of lateral plate mesoderm | 2.34e-08 | 8 |
tongue | 2.40e-08 | 3 |
gustatory system | 2.40e-08 | 3 |
future tongue | 2.40e-08 | 3 |
endoderm-derived structure | 4.63e-08 | 160 |
endoderm | 4.63e-08 | 160 |
presumptive endoderm | 4.63e-08 | 160 |
respiratory tract | 5.22e-08 | 54 |
subdivision of digestive tract | 3.70e-07 | 118 |
respiratory primordium | 6.08e-07 | 38 |
endoderm of foregut | 6.08e-07 | 38 |