FFCP PHASE1:Hg19::chr11:2017110..2017135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2017110..2017135,+ | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_at_chr11:2017110..2017135,+ | |description=CAGE_peak_at_chr11:2017110..2017135,+ | ||
|id=chr11:2017110..2017135,+ | |id=chr11:2017110..2017135,+ | ||
|ontology_enrichment_celltype=CL:0000349!1.20e-08!3;CL:0002577!1.20e-08!3;CL:0002541!2.01e-08!3 | |ontology_enrichment_celltype=CL:0000349!1.20e-08!3;CL:0002577!1.20e-08!3;CL:0002541!2.01e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.42e-39;19!CL:0002577;1.66e-19;3!CL:0002536;1.05e-13;2!CL:0002537;1.52e-12;5!CL:0002541;7.04e-10;3!CL:0002616;5.58e-08;1!CL:0002581;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-39,19;CL:0002577,1.06e-19,3;CL:0002536,8.65e-14,2;CL:0002537,1.55e-12,5;CL:0002541,7.05e-10,3;CL:0002616,5.22e-08,1;CL:0002581,8.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-07;1!UBERON:0008947;4.91e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.10e-07;1!DOID:10165;2.10e-07;1!DOID:1798;2.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.80e-07,1;DOID:10165,1.80e-07,1;DOID:1798,1.80e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000478;1.89e-36;24!UBERON:0005631;2.64e-31;10!UBERON:0000158;2.64e-31;10!UBERON:0000305;3.75e-23;7!UBERON:0001737;1.02e-16;9!UBERON:0001557;1.02e-16;9!UBERON:0001987;8.92e-15;4!UBERON:0005406;5.51e-14;2!UBERON:0003124;7.04e-10;3!UBERON:0000920;7.04e-10;3!UBERON:0001723;2.53e-09;3!UBERON:0001033;2.53e-09;3!UBERON:0002426;6.37e-08;1!UBERON:0003831;6.37e-08;1!UBERON:0003898;6.37e-08;1!UBERON:0004830;6.37e-08;1!UBERON:0003830;6.37e-08;1!UBERON:0005175;6.37e-08;1!UBERON:0001774;6.37e-08;1!UBERON:0001103;6.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.35e-44,14;UBERON:0000158,1.35e-44,14;UBERON:0000478,1.60e-36,24;UBERON:0000305,3.35e-23,7;UBERON:0003124,5.05e-23,7;UBERON:0004871,2.78e-20,8;UBERON:0001737,1.00e-16,9;UBERON:0001557,5.95e-15,19;UBERON:0001987,6.42e-15,4;UBERON:0004340,6.42e-15,4;UBERON:0005406,4.26e-14,2;UBERON:0000920,7.05e-10,3;UBERON:0004923,8.96e-10,66;UBERON:0001723,2.75e-09,3;UBERON:0001033,2.75e-09,3;UBERON:0010056,2.75e-09,3;UBERON:0002426,6.37e-08,1;UBERON:0003831,6.37e-08,1;UBERON:0003898,6.37e-08,1;UBERON:0004830,6.37e-08,1;UBERON:0003830,6.37e-08,1;UBERON:0005175,6.37e-08,1;UBERON:0001774,6.37e-08,1;UBERON:0001103,6.37e-08,1;UBERON:0010084,6.37e-08,1;UBERON:0000072,3.26e-07,47 | |||
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| ||
|short_description=p@chr11:2017110..2017135,+ | |short_description=p@chr11:2017110..2017135,+ | ||
}} | }} |
Latest revision as of 20:54, 23 July 2015
Short description: | p@chr11:2017110..2017135, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2017110..2017135, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.51e-39 | 19 |
placental epithelial cell | 1.06e-19 | 3 |
amniotic epithelial cell | 8.65e-14 | 2 |
amnion mesenchymal stem cell | 1.55e-12 | 5 |
chorionic membrane mesenchymal stem cell | 7.05e-10 | 3 |
perirenal adipocyte cell | 5.22e-08 | 1 |
perirenal preadipocyte | 8.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.35e-44 | 14 |
membranous layer | 1.35e-44 | 14 |
extraembryonic structure | 1.60e-36 | 24 |
amnion | 3.35e-23 | 7 |
chorion | 5.05e-23 | 7 |
somatic layer of lateral plate mesoderm | 2.78e-20 | 8 |
larynx | 1.00e-16 | 9 |
upper respiratory tract | 5.95e-15 | 19 |
placenta | 6.42e-15 | 4 |
allantois | 6.42e-15 | 4 |
perirenal fat | 4.26e-14 | 2 |
egg chorion | 7.05e-10 | 3 |
organ component layer | 8.96e-10 | 66 |
tongue | 2.75e-09 | 3 |
gustatory system | 2.75e-09 | 3 |
future tongue | 2.75e-09 | 3 |
chest muscle | 6.37e-08 | 1 |
respiratory system muscle | 6.37e-08 | 1 |
skeletal muscle of trunk | 6.37e-08 | 1 |
respiratory system skeletal muscle | 6.37e-08 | 1 |
thoracic segment muscle | 6.37e-08 | 1 |
chest organ | 6.37e-08 | 1 |
muscle of trunk | 6.37e-08 | 1 |
diaphragm | 6.37e-08 | 1 |
future diaphragm | 6.37e-08 | 1 |
segment of respiratory tract | 3.26e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.80e-07 | 1 |
endocrine pancreas cancer | 1.80e-07 | 1 |
pancreatic endocrine carcinoma | 1.80e-07 | 1 |