FFCP PHASE1:Hg19::chr11:19998187..19998192,+: Difference between revisions
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|id=chr11:19998187..19998192,+
|short_description=p@chr11:19998187..19998192,+
|description=CAGE_peak_at_chr11:19998187..19998192,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:19998187..19998192,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr11:19998187..19998192,+ | |||
|id=chr11:19998187..19998192,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.41e-25!12;CL:0000417!1.41e-25!12;CL:0000668!1.41e-25!12;CL:0000414!1.41e-25!12;CL:0000412!1.41e-25!12;CL:0000182!1.41e-25!12;CL:0002623!2.59e-12!3;CL:0000223!1.45e-09!59;CL:0000622!6.55e-08!5;CL:0000154!8.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.59e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.59e-50,12;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-54;11!UBERON:0009497;3.04e-46;13!UBERON:0001041;8.87e-21;30!UBERON:0003104;1.08e-19;31!CL:0000223;9.26e-08;58 | |||
|ontology_enrichment_disease=DOID:7!3.82e-14!39;DOID:17!7.49e-08!5;DOID:450!7.49e-08!5;DOID:66!7.49e-08!5;DOID:423!7.49e-08!5;DOID:0080000!7.49e-08!5;DOID:11722!7.49e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:7;7.13e-17;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.93e-16,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!2.49e-28!19;UBERON:0006925!2.49e-28!19;UBERON:0008836!2.49e-28!19;UBERON:0002365!5.02e-27!31;UBERON:0002330!5.02e-27!31;UBERON:0008835!1.43e-24!22;UBERON:0003894!1.43e-24!22;UBERON:0009854!1.55e-23!23;UBERON:0007499!1.03e-21!25;UBERON:0009497!1.03e-21!25;UBERON:0000015!1.03e-21!25;UBERON:0002423!1.03e-21!25;UBERON:0006235!1.03e-21!25;UBERON:0004161!1.03e-21!25;UBERON:0005057!6.62e-21!26;UBERON:0009856!6.62e-21!26;UBERON:0002368!1.05e-15!35;UBERON:0002530!1.78e-14!59;UBERON:0000949!2.36e-12!45;UBERON:0003929!2.17e-10!54;UBERON:0005172!3.28e-10!55;UBERON:0005173!3.28e-10!55;UBERON:0002417!2.94e-09!61;UBERON:0000916!2.94e-09!61;UBERON:0001041!6.84e-09!98;UBERON:0005911!5.19e-07!82;UBERON:0000466!5.41e-07!126;UBERON:0001044!8.48e-07!6;UBERON:0003293!8.48e-07!6;UBERON:0003294!8.48e-07!6;UBERON:0010047!8.48e-07!6;UBERON:0000167!8.48e-07!6;UBERON:0000077!8.68e-07!130;UBERON:0004921!8.68e-07!129;UBERON:0004185!8.68e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.31e-18;31!UBERON:0002330;1.31e-18;31!UBERON:0002368;1.59e-17;33!UBERON:0000949;1.28e-13;43!UBERON:0002530;5.60e-08;57!UBERON:0002417;1.64e-07;58!UBERON:0000916;1.64e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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|short_description=p@chr11:19998187..19998192,+ | |||
}} | }} |
Latest revision as of 20:52, 23 July 2015
Short description: | p@chr11:19998187..19998192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19998187..19998192, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.59e-50 | 12 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.52e-32 | 19 |
digestive gland | 4.52e-32 | 19 |
liver bud | 4.52e-32 | 19 |
hepatic diverticulum | 7.08e-28 | 22 |
liver primordium | 7.08e-28 | 22 |
digestive tract diverticulum | 1.01e-26 | 23 |
epithelial sac | 1.10e-24 | 25 |
epithelium of foregut-midgut junction | 1.10e-24 | 25 |
anatomical boundary | 1.10e-24 | 25 |
hepatobiliary system | 1.10e-24 | 25 |
foregut-midgut junction | 1.10e-24 | 25 |
septum transversum | 1.10e-24 | 25 |
sac | 8.76e-24 | 26 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
endocrine gland | 5.55e-18 | 35 |
endocrine system | 3.03e-14 | 45 |
gut epithelium | 4.68e-12 | 54 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
gland | 3.99e-11 | 59 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.93e-16 | 39 |