FFCP PHASE1:Hg19::chr11:1972811..1972820,+: Difference between revisions
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|id=chr11:1972811..1972820,+
|short_description=p@chr11:1972811..1972820,+
|description=CAGE_peak_at_chr11:1972811..1972820,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1972811..1972820,+ | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_at_chr11:1972811..1972820,+ | |||
|id=chr11:1972811..1972820,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.91e-35!12;CL:0000417!1.91e-35!12;CL:0000668!1.91e-35!12;CL:0000414!1.91e-35!12;CL:0000412!1.91e-35!12;CL:0000182!1.91e-35!12;CL:0002563!2.21e-12!4;CL:0000223!5.67e-12!59;CL:0002535!4.17e-07!2;CL:0002253!4.98e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.36e-53;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.89e-53,12;CL:0000223,1.35e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.33e-15;11!UBERON:0009497;3.64e-13;13!CL:0000223;3.75e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!4.69e-32!23;UBERON:0002107!5.44e-30!19;UBERON:0006925!5.44e-30!19;UBERON:0008836!5.44e-30!19;UBERON:0009856!2.83e-28!26;UBERON:0008835!7.77e-26!22;UBERON:0003894!7.77e-26!22;UBERON:0007499!1.12e-22!25;UBERON:0009497!1.12e-22!25;UBERON:0000015!1.12e-22!25;UBERON:0002423!1.12e-22!25;UBERON:0006235!1.12e-22!25;UBERON:0004161!1.12e-22!25;UBERON:0005057!8.77e-22!26;UBERON:0002365!3.49e-18!31;UBERON:0002330!3.49e-18!31;UBERON:0003929!1.36e-16!54;UBERON:0002368!4.85e-16!35;UBERON:0001154!5.38e-13!1;UBERON:0001153!5.38e-13!1;UBERON:0005172!6.63e-13!55;UBERON:0005173!6.63e-13!55;UBERON:0001242!2.21e-12!4;UBERON:0001262!2.21e-12!4;UBERON:0004786!2.21e-12!4;UBERON:0004808!2.21e-12!4;UBERON:0001277!2.21e-12!4;UBERON:0000949!2.41e-12!45;UBERON:0002417!1.49e-11!61;UBERON:0000916!1.49e-11!61;UBERON:0005911!1.45e-10!82;UBERON:0004907!3.42e-10!5;UBERON:0003350!4.32e-10!5;UBERON:0004921!1.61e-09!129;UBERON:0004185!1.61e-09!129;UBERON:0002530!2.89e-09!59;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0006955!4.17e-07!2;UBERON:0004801!4.17e-07!2;UBERON:0004119!6.40e-07!169;UBERON:0000925!6.40e-07!169;UBERON:0006595!6.40e-07!169;UBERON:0000160!6.90e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.47e-34;19!UBERON:0006925;9.47e-34;19!UBERON:0002423;7.21e-26;25!UBERON:0002365;1.06e-21;31!UBERON:0002330;1.06e-21;31!UBERON:0002368;5.36e-19;33!UBERON:0000949;8.70e-16;43!UBERON:0002530;1.18e-11;57!UBERON:0002108;2.63e-09;4!UBERON:0005172;4.32e-09;52!UBERON:0005173;4.32e-09;52!UBERON:0002417;1.86e-08;58!UBERON:0000916;1.86e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.08e-34,19;UBERON:0006925,9.08e-34,19;UBERON:0008836,9.08e-34,19;UBERON:0008835,2.73e-29,22;UBERON:0003894,2.73e-29,22;UBERON:0009854,4.68e-28,23;UBERON:0007499,6.98e-26,25;UBERON:0009497,6.98e-26,25;UBERON:0000015,6.98e-26,25;UBERON:0002423,6.98e-26,25;UBERON:0006235,6.98e-26,25;UBERON:0004161,6.98e-26,25;UBERON:0009856,6.39e-25,26;UBERON:0002365,4.87e-21,31;UBERON:0002330,4.87e-21,31;UBERON:0002368,9.96e-19,35;UBERON:0000949,9.73e-15,45;UBERON:0003929,2.11e-12,54;UBERON:0005172,2.11e-12,54;UBERON:0005173,2.11e-12,54;UBERON:0002530,2.07e-11,59;UBERON:0002417,3.12e-11,60;UBERON:0000916,3.12e-11,60;UBERON:0002108,2.74e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0005911,2.17e-08,82;UBERON:0001041,6.09e-08,87;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005177,6.41e-07,101;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr11:1972811..1972820,+ | |||
}} | }} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:1972811..1972820, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1972811..1972820, + |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.89e-53 | 12 |
endodermal cell | 1.35e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.08e-34 | 19 |
digestive gland | 9.08e-34 | 19 |
liver bud | 9.08e-34 | 19 |
hepatic diverticulum | 2.73e-29 | 22 |
liver primordium | 2.73e-29 | 22 |
digestive tract diverticulum | 4.68e-28 | 23 |
epithelial sac | 6.98e-26 | 25 |
epithelium of foregut-midgut junction | 6.98e-26 | 25 |
anatomical boundary | 6.98e-26 | 25 |
hepatobiliary system | 6.98e-26 | 25 |
foregut-midgut junction | 6.98e-26 | 25 |
septum transversum | 6.98e-26 | 25 |
sac | 6.39e-25 | 26 |
exocrine gland | 4.87e-21 | 31 |
exocrine system | 4.87e-21 | 31 |
endocrine gland | 9.96e-19 | 35 |
endocrine system | 9.73e-15 | 45 |
gut epithelium | 2.11e-12 | 54 |
abdomen element | 2.11e-12 | 54 |
abdominal segment element | 2.11e-12 | 54 |
gland | 2.07e-11 | 59 |
abdominal segment of trunk | 3.12e-11 | 60 |
abdomen | 3.12e-11 | 60 |
small intestine | 2.74e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
endo-epithelium | 2.17e-08 | 82 |
foregut | 6.09e-08 | 87 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
trunk region element | 6.41e-07 | 101 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |