FFCP PHASE1:Hg19::chr11:1959810..1959817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1959810..1959817,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr11:1959810..1959817,+ | |description=CAGE_peak_at_chr11:1959810..1959817,+ | ||
|id=chr11:1959810..1959817,+ | |id=chr11:1959810..1959817,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.15e-21;2!UBERON:0010056;5.15e-21;2!UBERON:0003104;4.50e-12;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001389;6.62e-41;1!UBERON:0000026;6.62e-41;1!UBERON:0008784;6.62e-41;1!UBERON:0006058;6.62e-41;1!UBERON:0003663;6.62e-41;1!UBERON:0004256;6.62e-41;1!UBERON:0004708;6.62e-41;1!UBERON:0002101;6.62e-41;1!UBERON:0004709;6.62e-41;1!UBERON:0002529;6.62e-41;1!UBERON:0010538;6.62e-41;1!UBERON:0003661;6.62e-41;1!UBERON:0010890;6.62e-41;1!UBERON:0002471;6.62e-41;1!UBERON:0001383;6.62e-41;1!UBERON:0010758;6.62e-41;1!UBERON:0010707;6.62e-41;1!UBERON:0000978;6.62e-41;1!UBERON:0002103;6.62e-41;1!UBERON:0001665;6.62e-41;1!UBERON:0003823;6.62e-41;1!UBERON:0000154;6.62e-41;1!UBERON:0010709;6.62e-41;1!UBERON:0001134;4.85e-23;16!UBERON:0002036;4.85e-23;16!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0003127;5.15e-21;2!UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0002385;1.03e-12;31!UBERON:0001015;1.03e-12;31!UBERON:0000383;1.03e-12;31!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!2.73e-37!2;UBERON:0005090!2.73e-37!2;UBERON:0001723!5.50e-25!3;UBERON:0001033!5.50e-25!3;UBERON:0010056!5.50e-25!3;UBERON:0005418!8.95e-20!1;UBERON:0001389!8.95e-20!1;UBERON:0000026!8.95e-20!1;UBERON:0008784!8.95e-20!1;UBERON:0006058!8.95e-20!1;UBERON:0003663!8.95e-20!1;UBERON:0001383!8.95e-20!1;UBERON:0004256!8.95e-20!1;UBERON:0002529!8.95e-20!1;UBERON:0004708!8.95e-20!1;UBERON:0002101!8.95e-20!1;UBERON:0004709!8.95e-20!1;UBERON:0003661!8.95e-20!1;UBERON:0002471!8.95e-20!1;UBERON:0004357!8.95e-20!1;UBERON:0009872!8.95e-20!1;UBERON:0004347!8.95e-20!1;UBERON:0005420!8.95e-20!1;UBERON:0005732!8.95e-20!1;UBERON:0006057!8.95e-20!1;UBERON:0000978!8.95e-20!1;UBERON:0002103!8.95e-20!1;UBERON:0001665!8.95e-20!1;UBERON:0003823!8.95e-20!1;UBERON:0000154!8.95e-20!1;UBERON:0005733!8.95e-20!1;UBERON:0005730!8.95e-20!1;UBERON:0002426!2.25e-19!1;UBERON:0003831!2.25e-19!1;UBERON:0003898!2.25e-19!1;UBERON:0004830!2.25e-19!1;UBERON:0001774!2.25e-19!1;UBERON:0003830!2.25e-19!1;UBERON:0005175!2.25e-19!1;UBERON:0003897!2.25e-19!1;UBERON:0001103!2.25e-19!1;UBERON:0010084!2.25e-19!1;UBERON:0007029!3.25e-19!1;UBERON:0008814!2.10e-11!15;UBERON:0003127!1.72e-10!2;UBERON:0000341!2.99e-10!2;UBERON:0001042!3.50e-08!10;UBERON:0009145!3.50e-08!10;UBERON:0006562!1.62e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.62e-41;1!UBERON:0000026;6.62e-41;1!UBERON:0008784;6.62e-41;1!UBERON:0006058;6.62e-41;1!UBERON:0003663;6.62e-41;1!UBERON:0004256;6.62e-41;1!UBERON:0004708;6.62e-41;1!UBERON:0002101;6.62e-41;1!UBERON:0004709;6.62e-41;1!UBERON:0002529;6.62e-41;1!UBERON:0010538;6.62e-41;1!UBERON:0003661;6.62e-41;1!UBERON:0010890;6.62e-41;1!UBERON:0002471;6.62e-41;1!UBERON:0001383;6.62e-41;1!UBERON:0010758;6.62e-41;1!UBERON:0010707;6.62e-41;1!UBERON:0000978;6.62e-41;1!UBERON:0002103;6.62e-41;1!UBERON:0001665;6.62e-41;1!UBERON:0003823;6.62e-41;1!UBERON:0000154;6.62e-41;1!UBERON:0010709;6.62e-41;1!UBERON:0001134;4.85e-23;16!UBERON:0002036;4.85e-23;16!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0003127;5.15e-21;2!UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0002385;1.03e-12;31!UBERON:0001015;1.03e-12;31!UBERON:0000383;1.03e-12;31!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.62e-41,1;UBERON:0001389,6.62e-41,1;UBERON:0000026,6.62e-41,1;UBERON:0008784,6.62e-41,1;UBERON:0006058,6.62e-41,1;UBERON:0003663,6.62e-41,1;UBERON:0004256,6.62e-41,1;UBERON:0004708,6.62e-41,1;UBERON:0002101,6.62e-41,1;UBERON:0004709,6.62e-41,1;UBERON:0002529,6.62e-41,1;UBERON:0010538,6.62e-41,1;UBERON:0003661,6.62e-41,1;UBERON:0010890,6.62e-41,1;UBERON:0002471,6.62e-41,1;UBERON:0001383,6.62e-41,1;UBERON:0004357,6.62e-41,1;UBERON:0004347,6.62e-41,1;UBERON:0005420,6.62e-41,1;UBERON:0005732,6.62e-41,1;UBERON:0010758,6.62e-41,1;UBERON:0010707,6.62e-41,1;UBERON:0000978,6.62e-41,1;UBERON:0002103,6.62e-41,1;UBERON:0001665,6.62e-41,1;UBERON:0003823,6.62e-41,1;UBERON:0000154,6.62e-41,1;UBERON:0010709,6.62e-41,1;UBERON:0005733,6.62e-41,1;UBERON:0005730,6.62e-41,1;UBERON:0005090,3.11e-21,2;UBERON:0001630,3.11e-21,2;UBERON:0003127,4.66e-21,2;UBERON:0001723,1.40e-14,3;UBERON:0001033,1.40e-14,3;UBERON:0010056,1.40e-14,3;UBERON:0003126,5.70e-07,7;UBERON:0001005,5.70e-07,7 | |||
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|short_description=p@chr11:1959810..1959817,+ | |short_description=p@chr11:1959810..1959817,+ | ||
}} | }} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:1959810..1959817, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1959810..1959817, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.62e-41 | 1 |
soleus muscle | 6.62e-41 | 1 |
appendage | 6.62e-41 | 1 |
lower limb segment | 6.62e-41 | 1 |
multi-limb segment region | 6.62e-41 | 1 |
hindlimb muscle | 6.62e-41 | 1 |
hindlimb zeugopod muscle | 6.62e-41 | 1 |
paired limb/fin | 6.62e-41 | 1 |
limb | 6.62e-41 | 1 |
pelvic appendage | 6.62e-41 | 1 |
limb segment | 6.62e-41 | 1 |
paired limb/fin segment | 6.62e-41 | 1 |
limb muscle | 6.62e-41 | 1 |
pelvic complex muscle | 6.62e-41 | 1 |
zeugopod | 6.62e-41 | 1 |
muscle of leg | 6.62e-41 | 1 |
paired limb/fin bud | 6.62e-41 | 1 |
limb bud | 6.62e-41 | 1 |
pelvic appendage bud | 6.62e-41 | 1 |
limb/fin field | 6.62e-41 | 1 |
subdivision of organism along appendicular axis | 6.62e-41 | 1 |
appendage girdle complex | 6.62e-41 | 1 |
leg | 6.62e-41 | 1 |
hindlimb | 6.62e-41 | 1 |
triceps surae | 6.62e-41 | 1 |
hindlimb zeugopod | 6.62e-41 | 1 |
posterior region of body | 6.62e-41 | 1 |
pelvic complex | 6.62e-41 | 1 |
limb field | 6.62e-41 | 1 |
hindlimb/pelvic fin field | 6.62e-41 | 1 |
muscle structure | 3.11e-21 | 2 |
muscle organ | 3.11e-21 | 2 |
open tracheal system trachea | 4.66e-21 | 2 |
tongue | 1.40e-14 | 3 |
gustatory system | 1.40e-14 | 3 |
future tongue | 1.40e-14 | 3 |
trachea | 5.70e-07 | 7 |
respiratory airway | 5.70e-07 | 7 |