FFCP PHASE1:Hg19::chr11:16893031..16893035,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:16893031..16893035,- | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr11:16893031..16893035,- | |description=CAGE_peak_at_chr11:16893031..16893035,- | ||
|id=chr11:16893031..16893035,- | |id=chr11:16893031..16893035,- | ||
|ontology_enrichment_celltype=CL:0002334!1.79e-11!12;CL:0000349!4.35e-11!3;CL:0002577!4.35e-11!3;CL:0002580!5.08e-10!3;CL:0002579!1.12e-09!3;CL:0000055!7.45e-09!180;CL:0002536!7.87e-08!2 | |ontology_enrichment_celltype=CL:0002334!1.79e-11!12;CL:0000349!4.35e-11!3;CL:0002577!4.35e-11!3;CL:0002580!5.08e-10!3;CL:0002579!1.12e-09!3;CL:0000055!7.45e-09!180;CL:0002536!7.87e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002577;3.14e-41;3!CL:0000349;8.36e-34;19!CL:0002536;1.71e-27;2!CL:0002568;1.84e-14;1!CL:0000062;8.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.94e-41,3;CL:0000349,6.88e-34,19;CL:0002536,1.22e-27,2;CL:0002568,1.84e-14,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.81e-14!14;UBERON:0000158!6.81e-14!14;UBERON:0001987!7.46e-14!4;UBERON:0004340!7.46e-14!4;UBERON:0003688!1.88e-12!6;UBERON:0002358!1.88e-12!6;UBERON:0003684!1.88e-12!6;UBERON:0001178!1.88e-12!6;UBERON:0003124!1.44e-11!7;UBERON:0000478!1.73e-09!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.99e-31;4!UBERON:0000478;1.11e-26;24!UBERON:0000305;1.27e-17;7!UBERON:0007195;1.84e-14;1!UBERON:0005631;1.58e-12;10!UBERON:0000158;1.58e-12;10!UBERON:0001474;3.46e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.64e-34,14;UBERON:0000158,3.64e-34,14;UBERON:0001987,3.80e-31,4;UBERON:0004340,3.80e-31,4;UBERON:0000478,9.48e-27,24;UBERON:0003124,4.17e-18,7;UBERON:0000305,1.04e-17,7;UBERON:0004871,1.41e-15,8;UBERON:0007195,2.11e-14,1;UBERON:0004923,2.22e-09,66 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,3.05817920982241,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03056216018252,0.558350568994769,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,3.94065842880137,14.9791895559447,13.6075631998356,0.496215615637554,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.00726411300178,2.0627374980147,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,1.71567174531442,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.796191777397232,6.80047199927361,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,3.05817920982241,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03056216018252,0.558350568994769,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,3.94065842880137,14.9791895559447,13.6075631998356,0.496215615637554,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.00726411300178,2.0627374980147,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,1.71567174531442,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.796191777397232,6.80047199927361,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr11:16893031..16893035,- | |short_description=p@chr11:16893031..16893035,- | ||
}} | }} |
Latest revision as of 20:24, 23 July 2015
Short description: | p@chr11:16893031..16893035, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16893031..16893035, - |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.94e-41 | 3 |
extraembryonic cell | 6.88e-34 | 19 |
amniotic epithelial cell | 1.22e-27 | 2 |
mesenchymal stem cell of Wharton's jelly | 1.84e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.64e-34 | 14 |
membranous layer | 3.64e-34 | 14 |
placenta | 3.80e-31 | 4 |
allantois | 3.80e-31 | 4 |
extraembryonic structure | 9.48e-27 | 24 |
chorion | 4.17e-18 | 7 |
amnion | 1.04e-17 | 7 |
somatic layer of lateral plate mesoderm | 1.41e-15 | 8 |
stroma of bone marrow | 2.11e-14 | 1 |
organ component layer | 2.22e-09 | 66 |