FFCP PHASE1:Hg19::chr11:16633751..16633768,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:16633751..16633768,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr11:16633751..16633768,- | |description=CAGE_peak_at_chr11:16633751..16633768,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.94e-20;2!CL:0000540;4.17e-07;6!CL:0000404;4.17e-07;6 | |ontology_enrichment_celltype_v019=CL:0000047;5.94e-20;2!CL:0000540;4.17e-07;6!CL:0000404;4.17e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.74e-19,8;CL:0000540,4.17e-07,6;CL:0000031,4.17e-07,6;CL:0000404,4.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.27e-10;1!CL:0000031;4.17e-07;6 | |ontology_enrichment_development_v019=UBERON:0005425;1.27e-10;1!CL:0000031;4.17e-07;6 | ||
|ontology_enrichment_disease=DOID:171!3.85e-14!10 | |ontology_enrichment_disease=DOID:171!3.85e-14!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.00e-24;10!DOID:3095;4.74e-11;22!DOID:2994;4.74e-11;22 | |ontology_enrichment_disease_v019=DOID:171;2.00e-24;10!DOID:3095;4.74e-11;22!DOID:2994;4.74e-11;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.10e-24,10;DOID:3095,4.84e-11,22;DOID:2994,4.84e-11,22 | |||
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|short_description=p@chr11:16633751..16633768,- | |short_description=p@chr11:16633751..16633768,- | ||
}} | }} |
Latest revision as of 20:24, 23 July 2015
Short description: | p@chr11:16633751..16633768, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16633751..16633768, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.74e-19 | 8 |
neuron | 4.17e-07 | 6 |
neuroblast | 4.17e-07 | 6 |
electrically signaling cell | 4.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.45e-20 | 2 |
nervous system | 3.22e-15 | 89 |
duodenum | 1.16e-13 | 2 |
ectoderm-derived structure | 3.84e-13 | 171 |
ectoderm | 3.84e-13 | 171 |
presumptive ectoderm | 3.84e-13 | 171 |
central nervous system | 5.12e-12 | 81 |
neurectoderm | 1.40e-11 | 86 |
cranial nerve II | 1.10e-10 | 1 |
cranial nerve | 1.10e-10 | 1 |
nerve trunk | 1.10e-10 | 1 |
nerve connecting eye with brain | 1.10e-10 | 1 |
nerve | 1.10e-10 | 1 |
retinal neural layer | 1.10e-10 | 1 |
presumptive neural retina | 1.10e-10 | 1 |
nucleus accumbens | 1.77e-10 | 1 |
ventral striatum | 1.77e-10 | 1 |
corpus striatum | 3.78e-10 | 4 |
striatum | 3.78e-10 | 4 |
ventral part of telencephalon | 3.78e-10 | 4 |
future corpus striatum | 3.78e-10 | 4 |
small intestine | 1.48e-08 | 4 |
regional part of telencephalon | 4.62e-07 | 32 |
cerebral hemisphere | 4.62e-07 | 32 |
organ system subdivision | 6.43e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.10e-24 | 10 |
germ cell and embryonal cancer | 4.84e-11 | 22 |
germ cell cancer | 4.84e-11 | 22 |