FFCP PHASE1:Hg19::chr11:16117457..16117461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:16117457..16117461,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr11:16117457..16117461,- | |description=CAGE_peak_at_chr11:16117457..16117461,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.07e-17;2!CL:0000558;2.07e-17;2 | |ontology_enrichment_celltype_v019=CL:0000764;2.07e-17;2!CL:0000558;2.07e-17;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.76e-17,2;CL:0000765,1.76e-17,2;CL:0000050,1.76e-17,2;CL:0000038,1.76e-17,2;CL:0000558,1.76e-17,2;CL:0000547,1.76e-17,2;CL:0000549,1.76e-17,2;CL:0000550,1.76e-17,2;CL:0000552,1.76e-17,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.76e-09;1!UBERON:0005062;8.88e-09;4!UBERON:0007284;8.88e-09;4 | |ontology_enrichment_development_v019=UBERON:0005425;1.76e-09;1!UBERON:0005062;8.88e-09;4!UBERON:0007284;8.88e-09;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;4.25e-08;10 | |ontology_enrichment_disease_v019=DOID:171;4.25e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,4.30e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.17e-21!115;UBERON:0002346!1.72e-14!90;UBERON:0001893!1.98e-13!34;UBERON:0002780!1.26e-12!41;UBERON:0001890!1.26e-12!41;UBERON:0006240!1.26e-12!41;UBERON:0002791!1.46e-12!33;UBERON:0002020!3.16e-12!34;UBERON:0003528!3.16e-12!34;UBERON:0001049!3.45e-12!57;UBERON:0005068!3.45e-12!57;UBERON:0006241!3.45e-12!57;UBERON:0007135!3.45e-12!57;UBERON:0003080!3.53e-12!42;UBERON:0001869!1.34e-11!32;UBERON:0003075!3.14e-11!86;UBERON:0007284!3.14e-11!86;UBERON:0000073!1.63e-10!94;UBERON:0001016!1.63e-10!94;UBERON:0002616!2.49e-10!59;UBERON:0000955!3.60e-10!69;UBERON:0006238!3.60e-10!69;UBERON:0001017!6.76e-10!82;UBERON:0005743!7.29e-10!86;UBERON:0000956!7.69e-10!25;UBERON:0000203!7.69e-10!25;UBERON:0000924!1.13e-09!173;UBERON:0006601!1.13e-09!173;UBERON:0003056!5.06e-09!61;UBERON:0002619!2.07e-08!22;UBERON:0001950!5.01e-08!20;UBERON:0004121!1.45e-07!169;UBERON:0000153!9.98e-07!129;UBERON:0007811!9.98e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!9.17e-21!115;UBERON:0002346!1.72e-14!90;UBERON:0001893!1.98e-13!34;UBERON:0002780!1.26e-12!41;UBERON:0001890!1.26e-12!41;UBERON:0006240!1.26e-12!41;UBERON:0002791!1.46e-12!33;UBERON:0002020!3.16e-12!34;UBERON:0003528!3.16e-12!34;UBERON:0001049!3.45e-12!57;UBERON:0005068!3.45e-12!57;UBERON:0006241!3.45e-12!57;UBERON:0007135!3.45e-12!57;UBERON:0003080!3.53e-12!42;UBERON:0001869!1.34e-11!32;UBERON:0003075!3.14e-11!86;UBERON:0007284!3.14e-11!86;UBERON:0000073!1.63e-10!94;UBERON:0001016!1.63e-10!94;UBERON:0002616!2.49e-10!59;UBERON:0000955!3.60e-10!69;UBERON:0006238!3.60e-10!69;UBERON:0001017!6.76e-10!82;UBERON:0005743!7.29e-10!86;UBERON:0000956!7.69e-10!25;UBERON:0000203!7.69e-10!25;UBERON:0000924!1.13e-09!173;UBERON:0006601!1.13e-09!173;UBERON:0003056!5.06e-09!61;UBERON:0002619!2.07e-08!22;UBERON:0001950!5.01e-08!20;UBERON:0004121!1.45e-07!169;UBERON:0000153!9.98e-07!129;UBERON:0007811!9.98e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.76e-19;4!UBERON:0000923;1.76e-19;4!UBERON:0010316;1.76e-19;4!UBERON:0005291;1.76e-19;4!UBERON:0002133;1.23e-16;2!UBERON:0002050;1.06e-15;5!UBERON:0005423;1.06e-15;5!UBERON:0000922;2.59e-15;49!UBERON:0002108;5.76e-15;4!UBERON:0003978;2.08e-11;3!UBERON:0000946;2.08e-11;3!UBERON:0000160;7.11e-11;17!UBERON:0000941;1.76e-09;1!UBERON:0001785;1.76e-09;1!UBERON:0002464;1.76e-09;1!UBERON:0004904;1.76e-09;1!UBERON:0001021;1.76e-09;1!UBERON:0007029;3.53e-09;1!UBERON:0002135;3.53e-09;1!UBERON:0002134;3.53e-09;1!UBERON:0002426;3.53e-09;1!UBERON:0003831;3.53e-09;1!UBERON:0003898;3.53e-09;1!UBERON:0004830;3.53e-09;1!UBERON:0005208;3.53e-09;1!UBERON:0003830;3.53e-09;1!UBERON:0005175;3.53e-09;1!UBERON:0001774;3.53e-09;1!UBERON:0004145;3.53e-09;1!UBERON:0005946;3.53e-09;1!UBERON:0001103;3.53e-09;1!UBERON:0005965;3.53e-09;1!UBERON:0002078;3.53e-09;1!UBERON:0005409;1.79e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0002346;1.76e-19;4!UBERON:0000923;1.76e-19;4!UBERON:0010316;1.76e-19;4!UBERON:0005291;1.76e-19;4!UBERON:0002133;1.23e-16;2!UBERON:0002050;1.06e-15;5!UBERON:0005423;1.06e-15;5!UBERON:0000922;2.59e-15;49!UBERON:0002108;5.76e-15;4!UBERON:0003978;2.08e-11;3!UBERON:0000946;2.08e-11;3!UBERON:0000160;7.11e-11;17!UBERON:0000941;1.76e-09;1!UBERON:0001785;1.76e-09;1!UBERON:0002464;1.76e-09;1!UBERON:0004904;1.76e-09;1!UBERON:0001021;1.76e-09;1!UBERON:0007029;3.53e-09;1!UBERON:0002135;3.53e-09;1!UBERON:0002134;3.53e-09;1!UBERON:0002426;3.53e-09;1!UBERON:0003831;3.53e-09;1!UBERON:0003898;3.53e-09;1!UBERON:0004830;3.53e-09;1!UBERON:0005208;3.53e-09;1!UBERON:0003830;3.53e-09;1!UBERON:0005175;3.53e-09;1!UBERON:0001774;3.53e-09;1!UBERON:0004145;3.53e-09;1!UBERON:0005946;3.53e-09;1!UBERON:0001103;3.53e-09;1!UBERON:0005965;3.53e-09;1!UBERON:0002078;3.53e-09;1!UBERON:0005409;1.79e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.45e-16,2;UBERON:0002108,5.37e-15,4;UBERON:0003978,2.31e-11,3;UBERON:0009751,2.31e-11,3;UBERON:0000946,2.31e-11,3;UBERON:0002523,2.31e-11,3;UBERON:0005983,2.31e-11,3;UBERON:0002165,2.31e-11,3;UBERON:0002062,2.31e-11,3;UBERON:0007280,2.31e-11,3;UBERON:0000160,7.20e-11,17;UBERON:0000941,1.56e-09,1;UBERON:0001785,1.56e-09,1;UBERON:0002464,1.56e-09,1;UBERON:0004904,1.56e-09,1;UBERON:0001021,1.56e-09,1;UBERON:0003902,1.56e-09,1;UBERON:0005425,1.56e-09,1;UBERON:0002426,2.35e-09,1;UBERON:0003831,2.35e-09,1;UBERON:0003898,2.35e-09,1;UBERON:0004830,2.35e-09,1;UBERON:0003830,2.35e-09,1;UBERON:0005175,2.35e-09,1;UBERON:0001774,2.35e-09,1;UBERON:0001103,2.35e-09,1;UBERON:0010084,2.35e-09,1;UBERON:0007029,2.55e-09,1;UBERON:0002346,2.56e-09,86;UBERON:0002134,2.77e-09,1;UBERON:0005208,2.77e-09,1;UBERON:0005946,2.77e-09,1;UBERON:0005965,2.77e-09,1;UBERON:0002078,2.77e-09,1;UBERON:0002135,5.28e-09,1;UBERON:0005409,1.80e-07,25 | |||
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|short_description=p@chr11:16117457..16117461,- | |short_description=p@chr11:16117457..16117461,- | ||
}} | }} |
Latest revision as of 20:22, 23 July 2015
Short description: | p@chr11:16117457..16117461, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16117457..16117461, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.76e-17 | 2 |
erythroblast | 1.76e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 1.76e-17 | 2 |
erythroid progenitor cell | 1.76e-17 | 2 |
reticulocyte | 1.76e-17 | 2 |
proerythroblast | 1.76e-17 | 2 |
basophilic erythroblast | 1.76e-17 | 2 |
polychromatophilic erythroblast | 1.76e-17 | 2 |
orthochromatic erythroblast | 1.76e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.45e-16 | 2 |
small intestine | 5.37e-15 | 4 |
valve | 2.31e-11 | 3 |
cardiac mesenchyme | 2.31e-11 | 3 |
cardial valve | 2.31e-11 | 3 |
tunica intima | 2.31e-11 | 3 |
heart layer | 2.31e-11 | 3 |
endocardium | 2.31e-11 | 3 |
endocardial cushion | 2.31e-11 | 3 |
presumptive endocardium | 2.31e-11 | 3 |
intestine | 7.20e-11 | 17 |
cranial nerve II | 1.56e-09 | 1 |
cranial nerve | 1.56e-09 | 1 |
nerve trunk | 1.56e-09 | 1 |
nerve connecting eye with brain | 1.56e-09 | 1 |
nerve | 1.56e-09 | 1 |
retinal neural layer | 1.56e-09 | 1 |
presumptive neural retina | 1.56e-09 | 1 |
chest muscle | 2.35e-09 | 1 |
respiratory system muscle | 2.35e-09 | 1 |
skeletal muscle of trunk | 2.35e-09 | 1 |
respiratory system skeletal muscle | 2.35e-09 | 1 |
thoracic segment muscle | 2.35e-09 | 1 |
chest organ | 2.35e-09 | 1 |
muscle of trunk | 2.35e-09 | 1 |
diaphragm | 2.35e-09 | 1 |
future diaphragm | 2.35e-09 | 1 |
surface | 2.55e-09 | 1 |
neurectoderm | 2.56e-09 | 86 |
tricuspid valve | 2.77e-09 | 1 |
right atrium valve | 2.77e-09 | 1 |
outflow tract of atrium | 2.77e-09 | 1 |
outflow part of right atrium | 2.77e-09 | 1 |
right cardiac atrium | 2.77e-09 | 1 |
mitral valve | 5.28e-09 | 1 |
gastrointestinal system | 1.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.30e-08 | 10 |