FFCP PHASE1:Hg19::chr11:121976250..121976260,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:121976250..121976260,-
|short_description=p3@ENST00000534195
|description=CAGE_peak_3_at_ENST00000534195_5end
|association_with_transcript=-373bp_to_ENST0...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-373bp_to_ENST00000534195_5end | |||
|cluster_id=chr11:121976250..121976260,- | |||
|description=CAGE_peak_3_at_ENST00000534195_5end | |||
|id=chr11:121976250..121976260,- | |||
|ontology_enrichment_celltype=CL:0000128!1.64e-15!7;CL:0000126!1.64e-15!7;CL:0000127!1.64e-15!7;CL:0002453!1.64e-15!7;CL:0002319!6.56e-10!25;CL:0002605!3.27e-08!3;CL:0002603!1.53e-07!3;CL:0000064!1.79e-07!3;CL:0005012!1.79e-07!3;CL:0000067!1.79e-07!3;CL:0002304!1.79e-07!3;CL:0000243!2.50e-07!15;CL:0000125!2.50e-07!15;CL:0000030!2.50e-07!15;CL:0000339!2.50e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.57e-27;2!CL:0002605;1.77e-18;3!CL:0002319;3.26e-17;25!CL:0000540;1.01e-09;6!CL:0000404;1.01e-09;6!CL:0000128;1.85e-08;7!CL:0000126;1.85e-08;7!CL:0000127;1.85e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.32e-26,8;CL:0002605,2.12e-18,3;CL:0002319,3.08e-17,25;CL:0000133,4.89e-10,59;CL:0000540,9.68e-10,6;CL:0000031,9.68e-10,6;CL:0000404,9.68e-10,6;CL:0000128,1.99e-08,7;CL:0000126,1.99e-08,7;CL:0000127,1.99e-08,7;CL:0002453,1.99e-08,7;CL:0000221,3.57e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.01e-09;6!CL:0000133;8.67e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.18e-34!57;UBERON:0005068!1.18e-34!57;UBERON:0006241!1.18e-34!57;UBERON:0007135!1.18e-34!57;UBERON:0001017!3.65e-33!82;UBERON:0002616!3.85e-33!59;UBERON:0005743!4.20e-31!86;UBERON:0000955!4.46e-30!69;UBERON:0006238!4.46e-30!69;UBERON:0000073!4.24e-27!94;UBERON:0001016!4.24e-27!94;UBERON:0003075!4.86e-26!86;UBERON:0007284!4.86e-26!86;UBERON:0002346!2.08e-24!90;UBERON:0002780!1.41e-23!41;UBERON:0001890!1.41e-23!41;UBERON:0006240!1.41e-23!41;UBERON:0003080!7.25e-23!42;UBERON:0002020!1.44e-22!34;UBERON:0003528!1.44e-22!34;UBERON:0001893!4.45e-22!34;UBERON:0002791!8.52e-21!33;UBERON:0000033!1.71e-20!123;UBERON:0003056!5.66e-20!61;UBERON:0001869!3.27e-19!32;UBERON:0000153!5.24e-19!129;UBERON:0007811!5.24e-19!129;UBERON:0004121!1.35e-17!169;UBERON:0000924!6.75e-17!173;UBERON:0006601!6.75e-17!173;UBERON:0000956!7.02e-16!25;UBERON:0000203!7.02e-16!25;UBERON:0004733!6.98e-14!12;UBERON:0002028!6.98e-14!12;UBERON:0007277!6.98e-14!12;UBERON:0002298!3.99e-13!8;UBERON:0003076!4.27e-13!15;UBERON:0003057!4.27e-13!15;UBERON:0004732!1.16e-12!13;UBERON:0000475!5.11e-12!365;UBERON:0000025!7.55e-12!194;UBERON:0002619!4.00e-11!22;UBERON:0000483!9.63e-11!309;UBERON:0001950!1.66e-10!20;UBERON:0000119!1.69e-10!312;UBERON:0000477!2.92e-10!286;UBERON:0004111!4.74e-09!241;UBERON:0002680!1.21e-08!9;UBERON:0001895!1.21e-08!9;UBERON:0010092!1.21e-08!9;UBERON:0002420!2.22e-08!9;UBERON:0007245!2.22e-08!9;UBERON:0010009!2.22e-08!9;UBERON:0010011!2.22e-08!9;UBERON:0000454!2.22e-08!9;UBERON:0002308!3.12e-08!9;UBERON:0000125!3.12e-08!9;UBERON:0000481!1.58e-07!347;UBERON:0000988!1.60e-07!3;UBERON:0001778!1.79e-07!3;UBERON:0001775!1.79e-07!3;UBERON:0001896!1.83e-07!3;UBERON:0005290!1.83e-07!3;UBERON:0010096!1.83e-07!3;UBERON:0006331!2.18e-07!3;UBERON:0000349!3.99e-07!5;UBERON:0007023!5.35e-07!115;UBERON:0001871!6.14e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.69e-18;25!UBERON:0000203;3.69e-18;25!UBERON:0002791;4.82e-18;32!UBERON:0001869;4.83e-18;32!UBERON:0003528;1.72e-17;34!UBERON:0002020;1.72e-17;34!UBERON:0001893;2.72e-15;34!UBERON:0007195;1.72e-14;1!UBERON:0002780;1.28e-12;41!UBERON:0001890;1.28e-12;41!UBERON:0001950;1.61e-10;20!UBERON:0002619;1.26e-09;22!UBERON:0001016;9.26e-09;83!UBERON:0001871;1.42e-08;6!UBERON:0000073;1.53e-08;53!UBERON:0002616;1.53e-08;53!UBERON:0001876;6.80e-08;2!UBERON:0001875;6.80e-08;2!UBERON:0006514;6.80e-08;2!UBERON:0000955;2.63e-07;68!UBERON:0002420;9.10e-07;9!UBERON:0007245;9.10e-07;9!UBERON:0010009;9.10e-07;9!UBERON:0010011;9.10e-07;9!UBERON:0000454;9.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,3.43e-19,32;UBERON:0001869,3.43e-19,32;UBERON:0000956,3.37e-18,25;UBERON:0000203,3.37e-18,25;UBERON:0003528,4.55e-18,34;UBERON:0002020,4.55e-18,34;UBERON:0001893,4.55e-18,34;UBERON:0001017,4.75e-18,81;UBERON:0001016,3.65e-16,89;UBERON:0002780,5.63e-15,41;UBERON:0001890,5.63e-15,41;UBERON:0003080,5.63e-15,41;UBERON:0006240,5.63e-15,41;UBERON:0007195,3.15e-14,1;UBERON:0000073,1.57e-11,53;UBERON:0002616,1.57e-11,53;UBERON:0001049,6.77e-11,56;UBERON:0005068,6.77e-11,56;UBERON:0006241,6.77e-11,56;UBERON:0007135,6.77e-11,56;UBERON:0001950,1.42e-10,20;UBERON:0003056,5.68e-10,61;UBERON:0002619,1.13e-09,22;UBERON:0004121,1.44e-09,171;UBERON:0000924,1.44e-09,171;UBERON:0006601,1.44e-09,171;UBERON:0000955,9.11e-09,68;UBERON:0006238,9.11e-09,68;UBERON:0001871,1.27e-08,6;UBERON:0001876,5.02e-08,2;UBERON:0001875,8.60e-08,2;UBERON:0006514,8.60e-08,2;UBERON:0010371,2.52e-07,104;UBERON:0003075,2.67e-07,82;UBERON:0007284,2.67e-07,82;UBERON:0011216,5.40e-07,223;UBERON:0002346,6.16e-07,86;UBERON:0002420,8.84e-07,9;UBERON:0007245,8.84e-07,9;UBERON:0010009,8.84e-07,9;UBERON:0010011,8.84e-07,9;UBERON:0000454,8.84e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.626909442956176,1.43117993565528,0.821246550437305,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0.277064115484183,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0.675105328965065,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,0,1.67516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0.394584402849391,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,1.20084057741958,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.40781839786099,0.0657727735628491,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17796627838873,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.626909442956176,1.43117993565528,0.821246550437305,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0.277064115484183,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0.675105328965065,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,0,1.67516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0.394584402849391,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,1.20084057741958,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.40781839786099,0.0657727735628491,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17796627838873,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000534195 | |||
}} | }} |
Latest revision as of 19:16, 23 July 2015
Short description: | p3@ENST00000534195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000534195_5end |
Coexpression cluster: | NA |
Association with transcript: | -373bp_to_ENST00000534195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.32e-26 | 8 |
astrocyte of the cerebral cortex | 2.12e-18 | 3 |
neural cell | 3.08e-17 | 25 |
neurectodermal cell | 4.89e-10 | 59 |
neuron | 9.68e-10 | 6 |
neuroblast | 9.68e-10 | 6 |
electrically signaling cell | 9.68e-10 | 6 |
oligodendrocyte | 1.99e-08 | 7 |
macroglial cell | 1.99e-08 | 7 |
astrocyte | 1.99e-08 | 7 |
oligodendrocyte precursor cell | 1.99e-08 | 7 |
ectodermal cell | 3.57e-08 | 72 |