FFCP PHASE1:Hg19::chr11:119776054..119776060,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:119776054..119776060,+ | |||
|coexpression_cluster_id=C3097 | |||
|description=CAGE_peak_at_chr11:119776054..119776060,+ | |description=CAGE_peak_at_chr11:119776054..119776060,+ | ||
|id=chr11:119776054..119776060,+ | |id=chr11:119776054..119776060,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.08e-13;7!CL:0000586;1.08e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.06e-13,7;CL:0000586,1.06e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.05e-12;1!UBERON:0009143;9.61e-12;1!UBERON:0005425;1.55e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.64e-12;1!DOID:10165;8.64e-12;1!DOID:1798;8.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.64e-12,1;DOID:10165,8.64e-12,1;DOID:1798,8.64e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.60e-11!129;UBERON:0004185!1.60e-11!129;UBERON:0001007!2.21e-10!155;UBERON:0001555!2.21e-10!155;UBERON:0007026!2.21e-10!155;UBERON:0001155!3.41e-10!9;UBERON:0007023!5.53e-10!115;UBERON:0005409!5.61e-10!35;UBERON:0004119!7.46e-10!169;UBERON:0000925!7.46e-10!169;UBERON:0006595!7.46e-10!169;UBERON:0000160!4.25e-09!27;UBERON:0001042!1.92e-08!10;UBERON:0009145!1.92e-08!10;UBERON:0000059!2.91e-08!11;UBERON:0000077!4.20e-08!130;UBERON:0003127!5.90e-08!2;UBERON:0000341!6.11e-08!2;UBERON:0006562!1.21e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.00e-28;22!UBERON:0000160;2.60e-28;17!UBERON:0004921;1.77e-26;33!UBERON:0002108;1.31e-19;4!UBERON:0001155;2.29e-19;9!UBERON:0000059;6.76e-16;11!UBERON:0001555;4.70e-13;54!UBERON:0001154;5.05e-12;1!UBERON:0001153;5.05e-12;1!UBERON:0009854;5.05e-12;1!UBERON:0002372;6.97e-12;1!UBERON:0001961;6.97e-12;1!UBERON:0001744;6.97e-12;1!UBERON:0001042;6.97e-12;1!UBERON:0001735;6.97e-12;1!UBERON:0000941;1.55e-11;1!UBERON:0001785;1.55e-11;1!UBERON:0002464;1.55e-11;1!UBERON:0004904;1.55e-11;1!UBERON:0001021;1.55e-11;1!UBERON:0001007;1.12e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.60e-28,17;UBERON:0005409,2.56e-25,25;UBERON:0002108,1.23e-19,4;UBERON:0001155,2.40e-19,9;UBERON:0000059,7.02e-16,11;UBERON:0001154,5.62e-12,1;UBERON:0001153,5.62e-12,1;UBERON:0001045,5.62e-12,1;UBERON:0002372,6.97e-12,1;UBERON:0001961,6.97e-12,1;UBERON:0001744,6.97e-12,1;UBERON:0001735,6.97e-12,1;UBERON:0000941,1.63e-11,1;UBERON:0001785,1.63e-11,1;UBERON:0002464,1.63e-11,1;UBERON:0004904,1.63e-11,1;UBERON:0001021,1.63e-11,1;UBERON:0003902,1.63e-11,1;UBERON:0005425,1.63e-11,1;UBERON:0004921,3.54e-09,118;UBERON:0001007,3.54e-07,145;UBERON:0001555,3.54e-07,145;UBERON:0007026,3.54e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3925675510275,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,8.01223355040328,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.307801034015188,0,1.84451123510448,1.6156375993759,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,16.9194528283346,8.22655349881054,17.1088440581415,0,0,0,0,0,0,0,0,0,0.789168805698781,9.67925728389311,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,4.07353869251362,0,0.225980740780532,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,6.28576066755414,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.266107110487916,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56306749457858,7.21246549663059,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,11.6853822119443,0,0,0,0,0,8.46442944824641,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,2.98527574661373,0.23806443146374,0.193766729508018,0.186224142887574,0,0,0,0.653150243690884,2.05339980651169,7.27402172557545,0.430333232356058,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3925675510275,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,8.01223355040328,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.307801034015188,0,1.84451123510448,1.6156375993759,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,16.9194528283346,8.22655349881054,17.1088440581415,0,0,0,0,0,0,0,0,0,0.789168805698781,9.67925728389311,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,4.07353869251362,0,0.225980740780532,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,6.28576066755414,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.266107110487916,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56306749457858,7.21246549663059,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,11.6853822119443,0,0,0,0,0,8.46442944824641,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,2.98527574661373,0.23806443146374,0.193766729508018,0.186224142887574,0,0,0,0.653150243690884,2.05339980651169,7.27402172557545,0.430333232356058,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:119776054..119776060,+ | |short_description=p@chr11:119776054..119776060,+ | ||
}} | }} |
Latest revision as of 19:03, 23 July 2015
Short description: | p@chr11:119776054..119776060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119776054..119776060, + |
Coexpression cluster: | C3097_colon_adenocarcinoma_stomach_ductus_small_duodenum_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.06e-13 | 7 |
germ cell | 1.06e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.60e-28 | 17 |
gastrointestinal system | 2.56e-25 | 25 |
small intestine | 1.23e-19 | 4 |
colon | 2.40e-19 | 9 |
large intestine | 7.02e-16 | 11 |
vermiform appendix | 5.62e-12 | 1 |
caecum | 5.62e-12 | 1 |
midgut | 5.62e-12 | 1 |
tonsil | 6.97e-12 | 1 |
mucosa-associated lymphoid tissue | 6.97e-12 | 1 |
lymphoid tissue | 6.97e-12 | 1 |
tonsillar ring | 6.97e-12 | 1 |
cranial nerve II | 1.63e-11 | 1 |
cranial nerve | 1.63e-11 | 1 |
nerve trunk | 1.63e-11 | 1 |
nerve connecting eye with brain | 1.63e-11 | 1 |
nerve | 1.63e-11 | 1 |
retinal neural layer | 1.63e-11 | 1 |
presumptive neural retina | 1.63e-11 | 1 |
subdivision of digestive tract | 3.54e-09 | 118 |
digestive system | 3.54e-07 | 145 |
digestive tract | 3.54e-07 | 145 |
primitive gut | 3.54e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.64e-12 | 1 |
endocrine pancreas cancer | 8.64e-12 | 1 |
pancreatic endocrine carcinoma | 8.64e-12 | 1 |