FFCP PHASE1:Hg19::chr11:116707803..116707818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116707803..116707818,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr11:116707803..116707818,+ | |description=CAGE_peak_at_chr11:116707803..116707818,+ | ||
|id=chr11:116707803..116707818,+ | |id=chr11:116707803..116707818,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.09e-23!12;CL:0000417!4.09e-23!12;CL:0000668!4.09e-23!12;CL:0000414!4.09e-23!12;CL:0000412!4.09e-23!12;CL:0000182!4.09e-23!12;CL:0000223!2.22e-09!59;CL:0002563!8.85e-09!4;CL:0002557!9.17e-09!1;CL:0002322!6.18e-07!5 | |ontology_enrichment_celltype=CL:0000181!4.09e-23!12;CL:0000417!4.09e-23!12;CL:0000668!4.09e-23!12;CL:0000414!4.09e-23!12;CL:0000412!4.09e-23!12;CL:0000182!4.09e-23!12;CL:0000223!2.22e-09!59;CL:0002563!8.85e-09!4;CL:0002557!9.17e-09!1;CL:0002322!6.18e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.50e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.46e-22,12;CL:0000223,3.24e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.88e-14;11!UBERON:0009497;3.59e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.54e-25!19;UBERON:0006925!1.54e-25!19;UBERON:0008836!1.54e-25!19;UBERON:0008835!6.48e-22!22;UBERON:0003894!6.48e-22!22;UBERON:0009854!6.46e-21!23;UBERON:0007499!3.70e-19!25;UBERON:0009497!3.70e-19!25;UBERON:0000015!3.70e-19!25;UBERON:0002423!3.70e-19!25;UBERON:0006235!3.70e-19!25;UBERON:0004161!3.70e-19!25;UBERON:0003929!1.02e-18!54;UBERON:0005057!2.22e-18!26;UBERON:0009856!2.22e-18!26;UBERON:0002365!3.05e-15!31;UBERON:0002330!3.05e-15!31;UBERON:0002368!2.24e-13!35;UBERON:0004921!2.09e-12!129;UBERON:0004185!2.09e-12!129;UBERON:0005911!1.33e-11!82;UBERON:0000949!3.69e-10!45;UBERON:0001007!7.69e-10!155;UBERON:0001555!7.69e-10!155;UBERON:0007026!7.69e-10!155;UBERON:0000160!1.45e-09!27;UBERON:0002530!1.89e-09!59;UBERON:0004119!8.74e-09!169;UBERON:0000925!8.74e-09!169;UBERON:0006595!8.74e-09!169;UBERON:0001242!8.85e-09!4;UBERON:0001262!8.85e-09!4;UBERON:0004786!8.85e-09!4;UBERON:0004808!8.85e-09!4;UBERON:0001277!8.85e-09!4;UBERON:0000485!2.98e-08!9;UBERON:0005172!4.13e-08!55;UBERON:0005173!4.13e-08!55;UBERON:0005409!2.52e-07!35;UBERON:0002417!3.32e-07!61;UBERON:0000916!3.32e-07!61;UBERON:0000490!3.44e-07!138;UBERON:0003350!3.46e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.08e-31;19!UBERON:0006925;2.08e-31;19!UBERON:0002423;7.27e-24;25!UBERON:0002365;3.98e-18;31!UBERON:0002330;3.98e-18;31!UBERON:0002368;4.87e-17;33!UBERON:0000160;7.34e-15;17!UBERON:0002108;4.69e-14;4!UBERON:0001007;7.54e-13;81!UBERON:0005409;1.05e-11;22!UBERON:0000949;1.36e-11;43!UBERON:0005172;5.68e-08;52!UBERON:0005173;5.68e-08;52!UBERON:0004921;6.55e-07;33!UBERON:0002114;9.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.03e-31,19;UBERON:0006925,2.03e-31,19;UBERON:0008836,2.03e-31,19;UBERON:0008835,3.92e-27,22;UBERON:0003894,3.92e-27,22;UBERON:0009854,5.94e-26,23;UBERON:0007499,7.13e-24,25;UBERON:0009497,7.13e-24,25;UBERON:0000015,7.13e-24,25;UBERON:0002423,7.13e-24,25;UBERON:0006235,7.13e-24,25;UBERON:0004161,7.13e-24,25;UBERON:0009856,5.94e-23,26;UBERON:0002365,3.08e-19,31;UBERON:0002330,3.08e-19,31;UBERON:0002368,5.00e-17,35;UBERON:0000160,6.83e-15,17;UBERON:0003929,9.17e-15,54;UBERON:0002108,4.39e-14,4;UBERON:0000949,3.27e-13,45;UBERON:0004921,3.78e-13,118;UBERON:0005172,5.60e-11,54;UBERON:0005173,5.60e-11,54;UBERON:0001007,1.46e-10,145;UBERON:0001555,1.46e-10,145;UBERON:0007026,1.46e-10,145;UBERON:0005409,2.05e-10,25;UBERON:0002530,4.97e-10,59;UBERON:0002417,7.37e-10,60;UBERON:0000916,7.37e-10,60;UBERON:0005911,1.38e-09,82;UBERON:0004119,1.70e-09,160;UBERON:0000925,1.70e-09,160;UBERON:0006595,1.70e-09,160;UBERON:0011216,5.99e-08,223 | |||
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|short_description=p@chr11:116707803..116707818,+ | |short_description=p@chr11:116707803..116707818,+ | ||
}} | }} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116707803..116707818, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116707803..116707818, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.46e-22 | 12 |
endodermal cell | 3.24e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.03e-31 | 19 |
digestive gland | 2.03e-31 | 19 |
liver bud | 2.03e-31 | 19 |
hepatic diverticulum | 3.92e-27 | 22 |
liver primordium | 3.92e-27 | 22 |
digestive tract diverticulum | 5.94e-26 | 23 |
epithelial sac | 7.13e-24 | 25 |
epithelium of foregut-midgut junction | 7.13e-24 | 25 |
anatomical boundary | 7.13e-24 | 25 |
hepatobiliary system | 7.13e-24 | 25 |
foregut-midgut junction | 7.13e-24 | 25 |
septum transversum | 7.13e-24 | 25 |
sac | 5.94e-23 | 26 |
exocrine gland | 3.08e-19 | 31 |
exocrine system | 3.08e-19 | 31 |
endocrine gland | 5.00e-17 | 35 |
intestine | 6.83e-15 | 17 |
gut epithelium | 9.17e-15 | 54 |
small intestine | 4.39e-14 | 4 |
endocrine system | 3.27e-13 | 45 |
subdivision of digestive tract | 3.78e-13 | 118 |
abdomen element | 5.60e-11 | 54 |
abdominal segment element | 5.60e-11 | 54 |
digestive system | 1.46e-10 | 145 |
digestive tract | 1.46e-10 | 145 |
primitive gut | 1.46e-10 | 145 |
gastrointestinal system | 2.05e-10 | 25 |
gland | 4.97e-10 | 59 |
abdominal segment of trunk | 7.37e-10 | 60 |
abdomen | 7.37e-10 | 60 |
endo-epithelium | 1.38e-09 | 82 |
endoderm-derived structure | 1.70e-09 | 160 |
endoderm | 1.70e-09 | 160 |
presumptive endoderm | 1.70e-09 | 160 |
organ system subdivision | 5.99e-08 | 223 |