FFCP PHASE1:Hg19::chr11:116707803..116707818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116707803..116707818,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr11:116707803..116707818,+ | |description=CAGE_peak_at_chr11:116707803..116707818,+ | ||
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|ontology_enrichment_celltype=CL:0000181!4.09e-23!12;CL:0000417!4.09e-23!12;CL:0000668!4.09e-23!12;CL:0000414!4.09e-23!12;CL:0000412!4.09e-23!12;CL:0000182!4.09e-23!12;CL:0000223!2.22e-09!59;CL:0002563!8.85e-09!4;CL:0002557!9.17e-09!1;CL:0002322!6.18e-07!5 | |ontology_enrichment_celltype=CL:0000181!4.09e-23!12;CL:0000417!4.09e-23!12;CL:0000668!4.09e-23!12;CL:0000414!4.09e-23!12;CL:0000412!4.09e-23!12;CL:0000182!4.09e-23!12;CL:0000223!2.22e-09!59;CL:0002563!8.85e-09!4;CL:0002557!9.17e-09!1;CL:0002322!6.18e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.50e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.50e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.46e-22,12;CL:0000223,3.24e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.88e-14;11!UBERON:0009497;3.59e-12;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.88e-14;11!UBERON:0009497;3.59e-12;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr11:116707803..116707818,+ | |short_description=p@chr11:116707803..116707818,+ | ||
}} | }} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116707803..116707818, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116707803..116707818, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.46e-22 | 12 |
endodermal cell | 3.24e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.03e-31 | 19 |
digestive gland | 2.03e-31 | 19 |
liver bud | 2.03e-31 | 19 |
hepatic diverticulum | 3.92e-27 | 22 |
liver primordium | 3.92e-27 | 22 |
digestive tract diverticulum | 5.94e-26 | 23 |
epithelial sac | 7.13e-24 | 25 |
epithelium of foregut-midgut junction | 7.13e-24 | 25 |
anatomical boundary | 7.13e-24 | 25 |
hepatobiliary system | 7.13e-24 | 25 |
foregut-midgut junction | 7.13e-24 | 25 |
septum transversum | 7.13e-24 | 25 |
sac | 5.94e-23 | 26 |
exocrine gland | 3.08e-19 | 31 |
exocrine system | 3.08e-19 | 31 |
endocrine gland | 5.00e-17 | 35 |
intestine | 6.83e-15 | 17 |
gut epithelium | 9.17e-15 | 54 |
small intestine | 4.39e-14 | 4 |
endocrine system | 3.27e-13 | 45 |
subdivision of digestive tract | 3.78e-13 | 118 |
abdomen element | 5.60e-11 | 54 |
abdominal segment element | 5.60e-11 | 54 |
digestive system | 1.46e-10 | 145 |
digestive tract | 1.46e-10 | 145 |
primitive gut | 1.46e-10 | 145 |
gastrointestinal system | 2.05e-10 | 25 |
gland | 4.97e-10 | 59 |
abdominal segment of trunk | 7.37e-10 | 60 |
abdomen | 7.37e-10 | 60 |
endo-epithelium | 1.38e-09 | 82 |
endoderm-derived structure | 1.70e-09 | 160 |
endoderm | 1.70e-09 | 160 |
presumptive endoderm | 1.70e-09 | 160 |
organ system subdivision | 5.99e-08 | 223 |