FFCP PHASE1:Hg19::chr11:116691490..116691522,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:116691490..116691522,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr11:116691490..116691522,- | |||
|id=chr11:116691490..116691522,- | |||
|ontology_enrichment_celltype=CL:0000181!1.47e-07!12;CL:0000417!1.47e-07!12;CL:0000668!1.47e-07!12;CL:0000414!1.47e-07!12;CL:0000412!1.47e-07!12;CL:0000182!1.47e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.34e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.34e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.25e-20!35;UBERON:0000160!5.92e-18!27;UBERON:0002108!9.83e-13!14;UBERON:0004921!6.00e-12!129;UBERON:0004185!6.00e-12!129;UBERON:0002107!5.18e-10!19;UBERON:0006925!5.18e-10!19;UBERON:0008836!5.18e-10!19;UBERON:0001007!7.06e-10!155;UBERON:0001555!7.06e-10!155;UBERON:0007026!7.06e-10!155;UBERON:0001155!9.24e-10!9;UBERON:0004119!5.07e-09!169;UBERON:0000925!5.07e-09!169;UBERON:0006595!5.07e-09!169;UBERON:0008835!9.94e-09!22;UBERON:0003894!9.94e-09!22;UBERON:0009854!2.25e-08!23;UBERON:0000059!3.76e-08!11;UBERON:0007499!9.46e-08!25;UBERON:0009497!9.46e-08!25;UBERON:0000015!9.46e-08!25;UBERON:0002423!9.46e-08!25;UBERON:0006235!9.46e-08!25;UBERON:0004161!9.46e-08!25;UBERON:0005057!1.79e-07!26;UBERON:0009856!1.79e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.26e-51;4!UBERON:0000160;9.82e-26;17!UBERON:0005409;2.78e-20;22!UBERON:0004921;7.82e-12;33!UBERON:0002114;7.07e-11;2!UBERON:0001007;1.64e-07;81!UBERON:0002107;6.97e-07;19!UBERON:0006925;6.97e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.37e-51,4;UBERON:0000160,9.82e-26,17;UBERON:0005409,5.17e-18,25;UBERON:0002114,7.42e-11,2;UBERON:0004921,8.36e-09,118;UBERON:0001007,3.37e-07,145;UBERON:0001555,3.37e-07,145;UBERON:0007026,3.37e-07,145;UBERON:0002107,6.97e-07,19;UBERON:0006925,6.97e-07,19;UBERON:0008836,6.97e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74218449960351,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93588206350518,2.62271472604749,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116691490..116691522,- | |||
}} |
Latest revision as of 18:28, 23 July 2015
Short description: | p@chr11:116691490..116691522, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116691490..116691522, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.34e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.37e-51 | 4 |
intestine | 9.82e-26 | 17 |
gastrointestinal system | 5.17e-18 | 25 |
duodenum | 7.42e-11 | 2 |
subdivision of digestive tract | 8.36e-09 | 118 |
digestive system | 3.37e-07 | 145 |
digestive tract | 3.37e-07 | 145 |
primitive gut | 3.37e-07 | 145 |
liver | 6.97e-07 | 19 |
digestive gland | 6.97e-07 | 19 |
liver bud | 6.97e-07 | 19 |