FFCP PHASE1:Hg19::chr10:8093055..8093080,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:8093055..8093080,-
|short_description=p@chr10:8093055..8093080,-
|description=CAGE_peak_at_chr10:8093055..8093080,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8093055..8093080,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr10:8093055..8093080,- | |||
|id=chr10:8093055..8093080,- | |||
|ontology_enrichment_celltype=CL:0002541!1.61e-09!3;CL:0002536!4.94e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.25e-17;5!CL:0002577;2.97e-13;3!CL:0000349;8.38e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.16e-13,3;CL:0000349,8.93e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.74e-19;2!UBERON:0008425;8.14e-11;1!UBERON:0005754;1.08e-10;1!UBERON:0003918;8.05e-09;10!UBERON:0007687;8.05e-09;10 | |||
|ontology_enrichment_disease=DOID:5093!1.05e-13!4;DOID:1612!1.05e-13!4;DOID:3095!1.17e-07!22;DOID:2994!1.17e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.90e-38;4!DOID:1612;5.90e-38;4!DOID:169;3.29e-14;6!DOID:3095;2.82e-10;22!DOID:2994;2.82e-10;22!DOID:171;9.71e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.90e-38,4;DOID:1612,5.90e-38,4;DOID:169,3.14e-14,6;DOID:3095,2.82e-10,22;DOID:2994,2.82e-10,22;DOID:171,9.45e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.38e-19!14;UBERON:0000158!1.38e-19!14;UBERON:0003124!6.86e-15!7;UBERON:0000478!1.61e-10!24;UBERON:0006947!2.32e-10!3;UBERON:0004054!2.32e-10!3;UBERON:0000476!1.61e-09!3;UBERON:0000920!1.61e-09!3;UBERON:0000489!5.45e-09!32;UBERON:0000310!5.20e-08!10;UBERON:0005904!7.53e-08!4;UBERON:0001987!2.38e-07!4;UBERON:0004340!2.38e-07!4;UBERON:0003064!2.67e-07!37;UBERON:0001443!3.09e-07!11;UBERON:0000305!3.81e-07!7;UBERON:0001008!6.77e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.16e-28;3!UBERON:0004054;7.16e-28;3!UBERON:0000310;3.23e-23;10!UBERON:0001443;4.21e-21;11!UBERON:0005904;4.46e-21;4!UBERON:0000013;6.25e-17;5!UBERON:0002410;6.25e-17;5!UBERON:0000998;1.08e-10;1!UBERON:0006868;1.08e-10;1!UBERON:0001000;1.30e-10;1!UBERON:0005352;1.30e-10;1!UBERON:0001987;3.62e-10;4!UBERON:0001301;4.14e-10;1!UBERON:0000010;1.18e-09;8!UBERON:0000058;9.08e-09;10!UBERON:0003135;5.15e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.84e-28,3;UBERON:0004054,6.84e-28,3;UBERON:0000310,3.23e-23,10;UBERON:0001443,4.21e-21,11;UBERON:0005904,4.31e-21,4;UBERON:0000013,5.92e-17,5;UBERON:0002410,5.92e-17,5;UBERON:0000998,1.08e-10,1;UBERON:0006868,1.08e-10,1;UBERON:0001000,1.30e-10,1;UBERON:0005352,1.30e-10,1;UBERON:0005631,1.71e-10,14;UBERON:0000158,1.71e-10,14;UBERON:0001987,3.79e-10,4;UBERON:0004340,3.79e-10,4;UBERON:0001301,3.96e-10,1;UBERON:0000010,1.14e-09,8;UBERON:0004175,5.04e-09,25;UBERON:0006554,1.02e-08,47;UBERON:0002113,1.51e-08,26;UBERON:0003918,1.51e-08,26;UBERON:0011143,1.51e-08,26;UBERON:0005095,1.51e-08,26;UBERON:0007687,1.51e-08,26;UBERON:0001008,1.61e-08,48;UBERON:0009569,4.00e-08,112;UBERON:0003135,5.09e-08,11;UBERON:0000489,3.84e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,1.44833593950726,0,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0.328875809207352,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,86.9224837755203,67.8204068054949,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06255142892519,0,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0,0,0,0,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.07875276582847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,17.7090877537959,23.7891199989652,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0.922255617552241,0.448788222048861,4.0199527611143,0.31900115973192,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2555081941567,4.45863999147484,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83683113910955,3.5582187760905,0,6.98941684428889,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0080633049642,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,21.9188406749786,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,1.44833593950726,0,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0.328875809207352,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,86.9224837755203,67.8204068054949,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06255142892519,0,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,0,0,0,0,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.07875276582847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,17.7090877537959,23.7891199989652,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0.922255617552241,0.448788222048861,4.0199527611143,0.31900115973192,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2555081941567,4.45863999147484,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83683113910955,3.5582187760905,0,6.98941684428889,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0080633049642,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,21.9188406749786,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr10:8093055..8093080,- | |||
}} | }} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:8093055..8093080, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8093055..8093080, - |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.16e-13 | 3 |
extraembryonic cell | 8.93e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.84e-28 | 3 |
internal male genitalia | 6.84e-28 | 3 |
breast | 3.23e-23 | 10 |
chest | 4.21e-21 | 11 |
duct of male reproductive system | 4.31e-21 | 4 |
sympathetic nervous system | 5.92e-17 | 5 |
autonomic nervous system | 5.92e-17 | 5 |
seminal vesicle | 1.08e-10 | 1 |
seminal fluid secreting gland | 1.08e-10 | 1 |
vas deferens | 1.30e-10 | 1 |
spermatic cord | 1.30e-10 | 1 |
extraembryonic membrane | 1.71e-10 | 14 |
membranous layer | 1.71e-10 | 14 |
placenta | 3.79e-10 | 4 |
allantois | 3.79e-10 | 4 |
epididymis | 3.96e-10 | 1 |
peripheral nervous system | 1.14e-09 | 8 |
internal genitalia | 5.04e-09 | 25 |
urinary system structure | 1.02e-08 | 47 |
kidney | 1.51e-08 | 26 |
kidney mesenchyme | 1.51e-08 | 26 |
upper urinary tract | 1.51e-08 | 26 |
kidney rudiment | 1.51e-08 | 26 |
kidney field | 1.51e-08 | 26 |
renal system | 1.61e-08 | 48 |
subdivision of trunk | 4.00e-08 | 112 |
male reproductive organ | 5.09e-08 | 11 |
cavitated compound organ | 3.84e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.90e-38 | 4 |
breast cancer | 5.90e-38 | 4 |
neuroendocrine tumor | 3.14e-14 | 6 |
germ cell and embryonal cancer | 2.82e-10 | 22 |
germ cell cancer | 2.82e-10 | 22 |
neuroectodermal tumor | 9.45e-09 | 10 |