FFCP PHASE1:Hg19::chr10:54082425..54082451,+: Difference between revisions
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|id=chr10:54082425..54082451,+
|short_description=p@chr10:54082425..54082451,+
|description=CAGE_peak_at_chr10:54082425..54082451,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:54082425..54082451,+ | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_at_chr10:54082425..54082451,+ | |||
|id=chr10:54082425..54082451,+ | |||
|ontology_enrichment_celltype=CL:1000413!1.41e-36!9;CL:0002544!1.42e-18!6;CL:0000071!6.76e-18!18;CL:0002546!6.76e-18!18;CL:0002139!3.27e-13!24;CL:0002620!7.34e-10!23;CL:0002573!1.03e-09!2;CL:0000115!8.66e-09!35;CL:0000213!3.08e-08!57;CL:0000215!3.08e-08!57;CL:0002563!6.42e-08!4;CL:0000076!1.85e-07!62;CL:0002078!8.16e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002563;6.47e-29;4!CL:1000413;6.82e-29;9!CL:0002253;2.37e-15;2!CL:0000071;7.17e-15;18!CL:0002139;2.43e-11;24!CL:0002078;5.94e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,6.82e-29,9;CL:0002563,7.46e-29,4;CL:0002253,2.37e-15,2;CL:0000071,7.17e-15,18;CL:0002546,7.17e-15,18;CL:0002139,2.43e-11,24;CL:0000115,8.74e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002546;7.17e-15;18 | |||
|ontology_enrichment_disease=DOID:4235!8.12e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.21e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.21e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0003915!1.41e-36!9;UBERON:0004700!1.41e-36!9;UBERON:0001917!1.41e-36!9;UBERON:0001986!6.76e-18!18;UBERON:0004638!6.76e-18!18;UBERON:0004852!6.76e-18!18;UBERON:0000487!1.72e-14!22;UBERON:0006914!1.19e-12!25;UBERON:0001637!2.55e-09!42;UBERON:0003509!2.55e-09!42;UBERON:0004572!2.55e-09!42;UBERON:0000947!5.31e-08!21;UBERON:0010191!5.31e-08!21;UBERON:0001242!6.42e-08!4;UBERON:0001262!6.42e-08!4;UBERON:0004786!6.42e-08!4;UBERON:0004808!6.42e-08!4;UBERON:0001277!6.42e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;6.47e-29;4!UBERON:0001262;6.47e-29;4!UBERON:0004786;6.47e-29;4!UBERON:0004808;6.47e-29;4!UBERON:0001277;6.47e-29;4!UBERON:0003915;6.82e-29;9!UBERON:0004700;6.82e-29;9!UBERON:0001917;6.82e-29;9!UBERON:0000490;2.62e-21;33!UBERON:0000485;5.13e-17;7!UBERON:0003929;5.13e-17;7!UBERON:0003350;5.04e-15;8!UBERON:0004638;7.17e-15;18!UBERON:0001986;7.17e-15;18!UBERON:0004852;7.17e-15;18!UBERON:0000487;2.64e-12;22!UBERON:0005409;8.72e-12;22!UBERON:0006914;6.47e-11;25!UBERON:0001052;2.43e-08;4!UBERON:0004921;2.69e-08;33!UBERON:0000160;3.24e-07;17!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0004907;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,6.82e-29,9;UBERON:0004700,6.82e-29,9;UBERON:0001917,6.82e-29,9;UBERON:0001242,7.46e-29,4;UBERON:0001262,7.46e-29,4;UBERON:0004786,7.46e-29,4;UBERON:0004808,7.46e-29,4;UBERON:0001277,7.46e-29,4;UBERON:0003350,5.41e-15,8;UBERON:0004638,7.17e-15,18;UBERON:0001986,7.17e-15,18;UBERON:0004852,7.17e-15,18;UBERON:0000485,1.91e-13,9;UBERON:0000487,2.64e-12,22;UBERON:0006914,6.47e-11,25;UBERON:0005409,1.71e-10,25;UBERON:0001052,2.43e-08,4;UBERON:0000160,3.34e-07,17;UBERON:0004907,6.39e-07,5;UBERON:0001637,9.24e-07,42;UBERON:0003509,9.24e-07,42;UBERON:0004572,9.24e-07,42 | |||
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|short_description=p@chr10:54082425..54082451,+ | |||
}} | }} |
Latest revision as of 14:10, 23 July 2015
Short description: | p@chr10:54082425..54082451, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54082425..54082451, + |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 6.82e-29 | 9 |
intestinal epithelial cell | 7.46e-29 | 4 |
epithelial cell of large intestine | 2.37e-15 | 2 |
blood vessel endothelial cell | 7.17e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.17e-15 | 18 |
endothelial cell of vascular tree | 2.43e-11 | 24 |
endothelial cell | 8.74e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 6.82e-29 | 9 |
arterial system endothelium | 6.82e-29 | 9 |
endothelium of artery | 6.82e-29 | 9 |
intestinal mucosa | 7.46e-29 | 4 |
wall of intestine | 7.46e-29 | 4 |
gastrointestinal system mucosa | 7.46e-29 | 4 |
gastrointestinal system epithelium | 7.46e-29 | 4 |
intestinal epithelium | 7.46e-29 | 4 |
epithelium of mucosa | 5.41e-15 | 8 |
blood vessel endothelium | 7.17e-15 | 18 |
endothelium | 7.17e-15 | 18 |
cardiovascular system endothelium | 7.17e-15 | 18 |
simple columnar epithelium | 1.91e-13 | 9 |
simple squamous epithelium | 2.64e-12 | 22 |
squamous epithelium | 6.47e-11 | 25 |
gastrointestinal system | 1.71e-10 | 25 |
rectum | 2.43e-08 | 4 |
intestine | 3.34e-07 | 17 |
lower digestive tract | 6.39e-07 | 5 |
artery | 9.24e-07 | 42 |
arterial blood vessel | 9.24e-07 | 42 |
arterial system | 9.24e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.21e-09 | 14 |