FFCP PHASE1:Hg19::chr10:52315156..52315181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:52315156..52315181,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr10:52315156..52315181,- | |description=CAGE_peak_at_chr10:52315156..52315181,- | ||
|id=chr10:52315156..52315181,- | |id=chr10:52315156..52315181,- | ||
|ontology_enrichment_celltype=CL:0000764;3.30e-16;2!CL:0000558;3.30e-16;2 | |ontology_enrichment_celltype=CL:0000764!7.32e-07!2;CL:0000765!7.32e-07!2;CL:0000050!7.32e-07!2;CL:0000038!7.32e-07!2;CL:0000558!7.32e-07!2;CL:0000547!7.32e-07!2;CL:0000549!7.32e-07!2;CL:0000550!7.32e-07!2;CL:0000552!7.32e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;3.30e-16;2!CL:0000558;3.30e-16;2 | ||
|ontology_enrichment_disease=DOID:1036;1.72e-22;8!DOID:8692;1.08e-16;31!DOID:1240;1.07e-11;39!DOID:2531;7.71e-08;51!DOID:0060083;7.71e-08;51 | |ontology_enrichment_celltype_v019_2=CL:0000764,3.30e-16,2;CL:0000765,3.30e-16,2;CL:0000050,3.30e-16,2;CL:0000038,3.30e-16,2;CL:0000558,3.30e-16,2;CL:0000547,3.30e-16,2;CL:0000549,3.30e-16,2;CL:0000550,3.30e-16,2;CL:0000552,3.30e-16,2 | ||
|ontology_enrichment_uberon=UBERON:0000178;2.10e-37;15!UBERON:0000179;2.10e-37;15!UBERON:0000463;2.10e-37;15!UBERON:0002390;2.50e-19;32!UBERON:0001905;1.12e-15;2!UBERON:0002757;1.12e-15;2!UBERON:0010134;1.12e-15;2!UBERON:0005408;1.12e-15;2!UBERON:0001899;1.12e-15;2!UBERON:0002193;9.57e-10;42!UBERON:0003296;2.80e-08;4!UBERON:0010133;2.80e-08;4!UBERON:0002784;2.80e-08;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!9.80e-12!8;DOID:8692!4.93e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.72e-22;8!DOID:8692;1.08e-16;31!DOID:1240;1.07e-11;39!DOID:2531;7.71e-08;51!DOID:0060083;7.71e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.53e-22,8;DOID:8692,3.27e-17,31;DOID:1240,2.12e-13,39;DOID:2531,6.34e-10,51;DOID:0060083,6.34e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.10e-13!15;UBERON:0000179!2.10e-13!15;UBERON:0000463!2.10e-13!15;UBERON:0007023!2.11e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-37;15!UBERON:0000179;2.10e-37;15!UBERON:0000463;2.10e-37;15!UBERON:0002390;2.50e-19;32!UBERON:0001905;1.12e-15;2!UBERON:0002757;1.12e-15;2!UBERON:0010134;1.12e-15;2!UBERON:0005408;1.12e-15;2!UBERON:0001899;1.12e-15;2!UBERON:0002193;9.57e-10;42!UBERON:0003296;2.80e-08;4!UBERON:0010133;2.80e-08;4!UBERON:0002784;2.80e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.24e-37,15;UBERON:0000179,2.24e-37,15;UBERON:0000463,2.24e-37,15;UBERON:0001905,1.16e-15,2;UBERON:0002757,1.16e-15,2;UBERON:0010134,1.16e-15,2;UBERON:0005408,1.16e-15,2;UBERON:0001899,1.16e-15,2;UBERON:0007023,2.39e-11,114;UBERON:0003296,2.85e-08,4;UBERON:0010133,2.85e-08,4;UBERON:0002784,2.85e-08,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.7513018835938,46.5355102824323,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,11.1638474031077,10.7049208999933,6.83576624608995,3.09701308095126,1.23408681925858,3.24236655596359,9.18053443304795,8.72437693923697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61928026063815,1.23087398947712,5.13865789104368,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,6.54227415789824,7.4503763040741,7.38414982693708,14.2315299543139,1.58936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940568614814168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0,0,11.9256200020999,0,0,0,0,0,6.13096789888697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.686520205190771,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,4.28561468702629,16.1416186665036,0,0,0.177404740325278,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,1.57248397188644,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,3.28735228665244,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,2.13233981900981,0.714193294391221,0,0.31037357147929,0,0.0636471582781649,0,0,0.684466602170562,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:52315156..52315181,- | |short_description=p@chr10:52315156..52315181,- | ||
}} | }} |
Latest revision as of 14:06, 23 July 2015
Short description: | p@chr10:52315156..52315181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52315156..52315181, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.30e-16 | 2 |
erythroblast | 3.30e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 3.30e-16 | 2 |
erythroid progenitor cell | 3.30e-16 | 2 |
reticulocyte | 3.30e-16 | 2 |
proerythroblast | 3.30e-16 | 2 |
basophilic erythroblast | 3.30e-16 | 2 |
polychromatophilic erythroblast | 3.30e-16 | 2 |
orthochromatic erythroblast | 3.30e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.24e-37 | 15 |
haemolymphatic fluid | 2.24e-37 | 15 |
organism substance | 2.24e-37 | 15 |
pineal body | 1.16e-15 | 2 |
regional part of epithalamus | 1.16e-15 | 2 |
secretory circumventricular organ | 1.16e-15 | 2 |
circumventricular organ | 1.16e-15 | 2 |
epithalamus | 1.16e-15 | 2 |
adult organism | 2.39e-11 | 114 |
gland of diencephalon | 2.85e-08 | 4 |
neuroendocrine gland | 2.85e-08 | 4 |
regional part of diencephalon | 2.85e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.53e-22 | 8 |
myeloid leukemia | 3.27e-17 | 31 |
leukemia | 2.12e-13 | 39 |
hematologic cancer | 6.34e-10 | 51 |
immune system cancer | 6.34e-10 | 51 |