FFCP PHASE1:Hg19::chr10:50606625..50606638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:50606625..50606638,- | |||
|coexpression_cluster_id=C171 | |coexpression_cluster_id=C171 | ||
|description=CAGE_peak_at_chr10:50606625..50606638,- | |description=CAGE_peak_at_chr10:50606625..50606638,- | ||
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|ontology_enrichment_celltype=CL:0002057!1.40e-17!42;CL:0000860!3.39e-16!45;CL:0002194!1.85e-10!63;CL:0000576!1.85e-10!63;CL:0000040!1.85e-10!63;CL:0000559!1.85e-10!63;CL:0000242!2.77e-10!2;CL:0002009!4.75e-10!65;CL:0000766!1.52e-09!76;CL:0000839!3.95e-09!70;CL:0000557!5.83e-09!71 | |ontology_enrichment_celltype=CL:0002057!1.40e-17!42;CL:0000860!3.39e-16!45;CL:0002194!1.85e-10!63;CL:0000576!1.85e-10!63;CL:0000040!1.85e-10!63;CL:0000559!1.85e-10!63;CL:0000242!2.77e-10!2;CL:0002009!4.75e-10!65;CL:0000766!1.52e-09!76;CL:0000839!3.95e-09!70;CL:0000557!5.83e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0000312;2.66e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000362;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0000312,2.66e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000362,7.48e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.24e-22!15;UBERON:0003057!2.24e-22!15;UBERON:0002240!4.91e-14!3;UBERON:0001049!2.18e-13!57;UBERON:0005068!2.18e-13!57;UBERON:0006241!2.18e-13!57;UBERON:0007135!2.18e-13!57;UBERON:0004733!9.68e-13!12;UBERON:0002028!9.68e-13!12;UBERON:0007277!9.68e-13!12;UBERON:0001017!1.96e-12!82;UBERON:0004732!1.04e-11!13;UBERON:0005743!1.11e-11!86;UBERON:0000073!1.56e-11!94;UBERON:0001016!1.56e-11!94;UBERON:0000200!5.34e-11!6;UBERON:0000007!3.17e-10!2;UBERON:0002298!2.54e-09!8;UBERON:0002371!6.98e-09!80;UBERON:0005174!1.35e-08!5;UBERON:0001137!1.35e-08!5;UBERON:0004765!1.68e-08!101;UBERON:0001434!1.68e-08!101;UBERON:0001474!4.77e-08!86;UBERON:0002680!5.81e-08!9;UBERON:0001895!5.81e-08!9;UBERON:0010092!5.81e-08!9;UBERON:0002616!7.53e-08!59;UBERON:0003075!7.68e-08!86;UBERON:0007284!7.68e-08!86;UBERON:0000955!2.04e-07!69;UBERON:0006238!2.04e-07!69;UBERON:0002346!2.33e-07!90;UBERON:0000988!4.09e-07!3;UBERON:0001896!6.00e-07!3;UBERON:0005290!6.00e-07!3;UBERON:0010096!6.00e-07!3 | |ontology_enrichment_uberon=UBERON:0003076!2.24e-22!15;UBERON:0003057!2.24e-22!15;UBERON:0002240!4.91e-14!3;UBERON:0001049!2.18e-13!57;UBERON:0005068!2.18e-13!57;UBERON:0006241!2.18e-13!57;UBERON:0007135!2.18e-13!57;UBERON:0004733!9.68e-13!12;UBERON:0002028!9.68e-13!12;UBERON:0007277!9.68e-13!12;UBERON:0001017!1.96e-12!82;UBERON:0004732!1.04e-11!13;UBERON:0005743!1.11e-11!86;UBERON:0000073!1.56e-11!94;UBERON:0001016!1.56e-11!94;UBERON:0000200!5.34e-11!6;UBERON:0000007!3.17e-10!2;UBERON:0002298!2.54e-09!8;UBERON:0002371!6.98e-09!80;UBERON:0005174!1.35e-08!5;UBERON:0001137!1.35e-08!5;UBERON:0004765!1.68e-08!101;UBERON:0001434!1.68e-08!101;UBERON:0001474!4.77e-08!86;UBERON:0002680!5.81e-08!9;UBERON:0001895!5.81e-08!9;UBERON:0010092!5.81e-08!9;UBERON:0002616!7.53e-08!59;UBERON:0003075!7.68e-08!86;UBERON:0007284!7.68e-08!86;UBERON:0000955!2.04e-07!69;UBERON:0006238!2.04e-07!69;UBERON:0002346!2.33e-07!90;UBERON:0000988!4.09e-07!3;UBERON:0001896!6.00e-07!3;UBERON:0005290!6.00e-07!3;UBERON:0010096!6.00e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.14e-26;2!UBERON:0000988;9.45e-18;3!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002298;1.44e-09;6!UBERON:0001894;2.18e-08;7!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000007;7.14e-26;2!UBERON:0000988;9.45e-18;3!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002298;1.44e-09;6!UBERON:0001894;2.18e-08;7!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.14e-26,2;UBERON:0000988,1.12e-17,3;UBERON:0003296,1.13e-13,4;UBERON:0010133,1.13e-13,4;UBERON:0002298,1.57e-09,6;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7;UBERON:0002680,8.85e-07,9;UBERON:0001895,8.85e-07,9;UBERON:0010092,8.85e-07,9 | |||
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| ||
|short_description=p@chr10:50606625..50606638,- | |short_description=p@chr10:50606625..50606638,- | ||
}} | }} |
Latest revision as of 14:01, 23 July 2015
Short description: | p@chr10:50606625..50606638, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:50606625..50606638, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
keratinocyte | 2.66e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
epidermal cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.14e-26 | 2 |
pons | 1.12e-17 | 3 |
gland of diencephalon | 1.13e-13 | 4 |
neuroendocrine gland | 1.13e-13 | 4 |
brainstem | 1.57e-09 | 6 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
regional part of metencephalon | 8.85e-07 | 9 |
metencephalon | 8.85e-07 | 9 |
future metencephalon | 8.85e-07 | 9 |