FFCP PHASE1:Hg19::chr10:18579850..18579872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:18579850..18579872,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr10:18579850..18579872,+ | |||
|id=chr10:18579850..18579872,+ | |||
|ontology_enrichment_celltype=CL:0000167!5.30e-10!1;CL:0000164!5.30e-10!1;CL:0000502!5.30e-10!1;CL:0000172!5.30e-10!1;CL:0000173!5.30e-10!1;CL:0002351!5.30e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.13e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.58e-25;3!UBERON:0006238;1.49e-07;10 | |||
|ontology_enrichment_disease=DOID:2355!3.10e-10!1;DOID:4430!5.30e-10!1;DOID:5409!9.85e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:2355;4.28e-19;1!DOID:74;3.13e-10;2!DOID:3093;5.39e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.25e-19,1;DOID:74,2.72e-10,2;DOID:3093,5.47e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0003296!7.74e-21!4;UBERON:0010133!7.74e-21!4;UBERON:0001905!3.13e-19!2;UBERON:0002757!3.13e-19!2;UBERON:0010134!3.13e-19!2;UBERON:0002784!3.13e-19!2;UBERON:0005408!3.13e-19!2;UBERON:0001899!3.13e-19!2;UBERON:0006331!3.18e-12!3;UBERON:0001894!3.72e-12!7;UBERON:0006222!3.72e-12!7;UBERON:0001736!4.44e-10!1;UBERON:0006298!4.44e-10!1;UBERON:0002038!8.24e-10!1;UBERON:0009661!8.24e-10!1;UBERON:0000966!4.15e-08!5;UBERON:0005388!4.15e-08!5;UBERON:0001802!4.15e-08!5;UBERON:0000970!3.04e-07!20;UBERON:0002104!6.65e-07!21;UBERON:0003075!7.89e-07!86;UBERON:0007284!7.89e-07!86;UBERON:0005743!8.39e-07!86;UBERON:0001044!9.15e-07!6;UBERON:0003293!9.15e-07!6;UBERON:0003294!9.15e-07!6;UBERON:0010047!9.15e-07!6;UBERON:0000167!9.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.36e-41;4!UBERON:0010133;2.36e-41;4!UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0001894;5.44e-24;7!UBERON:0002784;2.26e-19;4!UBERON:0000966;1.81e-15;5!UBERON:0005388;1.81e-15;5!UBERON:0001802;1.81e-15;5!UBERON:0000007;3.13e-10;2!UBERON:0006955;3.13e-10;2!UBERON:0004801;3.13e-10;2!UBERON:0000970;8.64e-09;20!UBERON:0002104;2.13e-08;21!UBERON:0000020;1.02e-07;23!UBERON:0001032;2.04e-07;24!UBERON:0004456;2.04e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.90e-41,4;UBERON:0010133,2.90e-41,4;UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0001894,6.12e-24,7;UBERON:0006222,6.12e-24,7;UBERON:0002784,2.26e-19,4;UBERON:0000966,4.81e-13,6;UBERON:0005388,4.81e-13,6;UBERON:0001802,4.81e-13,6;UBERON:0006955,3.27e-10,2;UBERON:0004801,3.27e-10,2;UBERON:0000007,3.58e-10,2;UBERON:0000970,2.16e-08,21;UBERON:0002104,2.16e-08,21;UBERON:0000020,2.06e-07,24;UBERON:0001032,2.06e-07,24;UBERON:0004456,2.06e-07,24;UBERON:0003056,2.20e-07,61 | |||
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|short_description=p@chr10:18579850..18579872,+ | |||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18579850..18579872, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18579850..18579872, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.90e-41 | 4 |
neuroendocrine gland | 2.90e-41 | 4 |
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
diencephalon | 6.12e-24 | 7 |
future diencephalon | 6.12e-24 | 7 |
regional part of diencephalon | 2.26e-19 | 4 |
retina | 4.81e-13 | 6 |
photoreceptor array | 4.81e-13 | 6 |
posterior segment of eyeball | 4.81e-13 | 6 |
uterine epithelium | 3.27e-10 | 2 |
cervix epithelium | 3.27e-10 | 2 |
pituitary gland | 3.58e-10 | 2 |
eye | 2.16e-08 | 21 |
visual system | 2.16e-08 | 21 |
sense organ | 2.06e-07 | 24 |
sensory system | 2.06e-07 | 24 |
entire sense organ system | 2.06e-07 | 24 |
pre-chordal neural plate | 2.20e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.25e-19 | 1 |
hematopoietic system disease | 2.72e-10 | 2 |
nervous system cancer | 5.47e-07 | 11 |