FFCP PHASE1:Hg19::chr10:105791095..105791110,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:105791095..105791110,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr10:105791095..105791110,- | |||
|id=chr10:105791095..105791110,- | |||
|ontology_enrichment_celltype=CL:0002251!2.56e-17!21;CL:0002621!2.98e-16!3;CL:0000349!1.39e-15!3;CL:0002577!1.39e-15!3;CL:0002541!4.07e-15!3;CL:0002076!6.72e-14!43;CL:0000223!4.70e-13!59;CL:0000066!1.08e-09!254;CL:0000240!4.33e-08!6;CL:0000311!4.33e-08!6;CL:0000079!4.33e-08!6;CL:0000237!4.33e-08!6;CL:0000036!4.33e-08!6;CL:0000357!4.33e-08!6;CL:0000114!4.33e-08!6;CL:0002623!3.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.28e-84;3!CL:0002536;2.05e-15;2!CL:0002251;1.84e-13;20!CL:0002577;9.90e-11;3!CL:0000244;2.26e-08;4!CL:0000731;2.26e-08;4!CL:0000312;4.79e-07;5!CL:0002076;5.96e-07;42!CL:0000349;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.27e-84,3;CL:0002536,2.37e-15,2;CL:0002251,2.01e-13,20;CL:0002577,8.99e-11,3;CL:0000244,1.96e-08,4;CL:0000731,1.96e-08,4;CL:0000312,4.79e-07,5;CL:0000349,6.57e-07,19;CL:0002076,9.61e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.20e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.92e-33!7;UBERON:0005631!2.45e-33!14;UBERON:0000158!2.45e-33!14;UBERON:0001987!4.22e-20!4;UBERON:0004340!4.22e-20!4;UBERON:0000478!1.20e-18!24;UBERON:0001949!2.98e-16!3;UBERON:0000476!4.07e-15!3;UBERON:0000920!4.07e-15!3;UBERON:0000166!1.34e-13!21;UBERON:0000165!1.39e-12!28;UBERON:0000930!1.39e-12!28;UBERON:0004923!1.14e-11!57;UBERON:0004119!5.78e-11!169;UBERON:0000925!5.78e-11!169;UBERON:0006595!5.78e-11!169;UBERON:0003729!4.19e-09!5;UBERON:0000995!1.09e-07!21;UBERON:0000161!1.16e-07!35;UBERON:0005795!2.60e-07!22;UBERON:0003975!2.60e-07!22;UBERON:0001004!2.98e-07!72;UBERON:0000305!5.58e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.28e-84;3!UBERON:0000486;5.99e-38;12!UBERON:0003929;7.11e-37;7!UBERON:0003350;2.19e-32;8!UBERON:0001828;2.19e-32;8!UBERON:0003729;2.82e-20;13!UBERON:0010371;1.22e-15;31!UBERON:0000161;3.96e-14;19!UBERON:0000166;3.96e-14;19!UBERON:0000344;1.84e-13;20!UBERON:0004807;2.64e-12;22!UBERON:0005911;6.14e-12;36!UBERON:0000165;8.04e-10;28!UBERON:0001987;2.26e-08;4!UBERON:0004923;4.87e-08;55!UBERON:0000365;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.27e-84,3;UBERON:0003350,2.71e-32,8;UBERON:0001828,2.71e-32,8;UBERON:0003729,3.21e-20,13;UBERON:0000344,2.01e-13,20;UBERON:0000166,2.85e-12,22;UBERON:0004923,5.01e-11,66;UBERON:0004807,8.55e-10,28;UBERON:0000165,1.76e-09,29;UBERON:0000930,1.76e-09,29;UBERON:0005631,4.75e-09,14;UBERON:0000158,4.75e-09,14;UBERON:0001987,2.11e-08,4;UBERON:0004340,2.11e-08,4;UBERON:0000161,9.16e-08,36;UBERON:0000365,5.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60951198716227,0,0.201057944823262,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,1.72202149068492,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.921482106297696,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:105791095..105791110,- | |||
}} |
Latest revision as of 10:04, 23 July 2015
Short description: | p@chr10:105791095..105791110, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105791095..105791110, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.27e-84 | 3 |
amniotic epithelial cell | 2.37e-15 | 2 |
epithelial cell of alimentary canal | 2.01e-13 | 20 |
placental epithelial cell | 8.99e-11 | 3 |
transitional epithelial cell | 1.96e-08 | 4 |
urothelial cell | 1.96e-08 | 4 |
keratinocyte | 4.79e-07 | 5 |
extraembryonic cell | 6.57e-07 | 19 |
endo-epithelial cell | 9.61e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.27e-84 | 3 |
epithelium of mucosa | 2.71e-32 | 8 |
gingiva | 2.71e-32 | 8 |
mouth mucosa | 3.21e-20 | 13 |
mucosa | 2.01e-13 | 20 |
oral opening | 2.85e-12 | 22 |
organ component layer | 5.01e-11 | 66 |
respiratory system epithelium | 8.55e-10 | 28 |
mouth | 1.76e-09 | 29 |
stomodeum | 1.76e-09 | 29 |
extraembryonic membrane | 4.75e-09 | 14 |
membranous layer | 4.75e-09 | 14 |
placenta | 2.11e-08 | 4 |
allantois | 2.11e-08 | 4 |
orifice | 9.16e-08 | 36 |
urothelium | 5.38e-07 | 5 |