FFCP PHASE1:Hg19::chr9:123163148..123163176,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=55755 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=120bp_to_ENST00000474262_5end | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_18_at_CDK5RAP2_5end | |||
|id=chr9:123163148..123163176,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;7.48e-30;1!CL:0000159;1.15e-15;2!CL:0002564;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.48e-30,1;CL:0000159,1.15e-15,2;CL:0002564,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0003076!3.48e-07!15;UBERON:0003057!3.48e-07!15;UBERON:0002298!6.28e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;9.90e-11;3!UBERON:0002242;9.90e-11;3!UBERON:0005290;9.90e-11;3!UBERON:0003343;1.82e-08;4!UBERON:0004785;1.82e-08;4!UBERON:0011135;6.04e-07;5!UBERON:0002216;6.04e-07;5!UBERON:0011134;6.04e-07;5!UBERON:0002209;6.04e-07;5!UBERON:0002213;6.04e-07;5!UBERON:0007844;6.04e-07;5!UBERON:0011138;6.04e-07;5!UBERON:0001130;6.04e-07;5!UBERON:0001066;6.04e-07;5!UBERON:0001468;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.99e-11,3;UBERON:0005290,8.99e-11,3;UBERON:0010096,8.99e-11,3;UBERON:0002242,1.20e-10,3;UBERON:0003068,1.20e-10,3;UBERON:0002328,1.20e-10,3;UBERON:0004880,1.20e-10,3;UBERON:0003343,1.82e-08,4;UBERON:0004785,1.82e-08,4;UBERON:0011135,6.77e-07,5;UBERON:0002216,6.77e-07,5;UBERON:0011134,6.77e-07,5;UBERON:0002209,6.77e-07,5;UBERON:0002213,6.77e-07,5;UBERON:0005856,6.77e-07,5;UBERON:0005866,6.77e-07,5;UBERON:0005863,6.77e-07,5;UBERON:0007844,6.77e-07,5;UBERON:0011138,6.77e-07,5;UBERON:0001130,6.77e-07,5;UBERON:0001066,6.77e-07,5;UBERON:0001468,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,1.24564449799115,0.75374599577023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.307007349452259,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0.824019371133798,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.290268993867255,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0.665574309221114,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0.655219697692825,8.8478247151339,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,2.71330363699803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.573358332605805,0.157771562193185,0,0,0,0.371995018166751,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p18@CDK5RAP2 | |||
}} |
Revision as of 03:04, 23 January 2014
Short description: | p18@CDK5RAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_CDK5RAP2_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 120bp_to_ENST00000474262_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.48e-30 | 1 |
seromucus secreting cell | 1.15e-15 | 2 |
nucleus pulposus cell of intervertebral disc | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.99e-11 | 3 |
myelencephalon | 8.99e-11 | 3 |
future myelencephalon | 8.99e-11 | 3 |
nucleus pulposus | 1.20e-10 | 3 |
axial mesoderm | 1.20e-10 | 3 |
notochord | 1.20e-10 | 3 |
chordamesoderm | 1.20e-10 | 3 |
mucosa of oral region | 1.82e-08 | 4 |
respiratory system mucosa | 1.82e-08 | 4 |
intervertebral cartilage | 6.77e-07 | 5 |
symphysis | 6.77e-07 | 5 |
nonsynovial joint | 6.77e-07 | 5 |
fibrous joint | 6.77e-07 | 5 |
cartilaginous joint | 6.77e-07 | 5 |
developing mesenchymal condensation | 6.77e-07 | 5 |
pre-cartilage condensation | 6.77e-07 | 5 |
cartilaginous condensation | 6.77e-07 | 5 |
cartilage element | 6.77e-07 | 5 |
post-cranial axial skeletal system | 6.77e-07 | 5 |
vertebral column | 6.77e-07 | 5 |
intervertebral disk | 6.77e-07 | 5 |
intervertebral joint | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.48e-30 | 1 |