FFCP PHASE1:Hg19::chr9:15553484..15553501,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29828 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=195bp_to_ENST00000474193_5end | |||
|description=CAGE_peak_8_at_C9orf93_5end | |||
|id=chr9:15553484..15553501,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000037;9.37e-11;1!CL:0001024;9.37e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,8.95e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.62e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!4.79e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-10;1!DOID:4549;2.62e-10;1!DOID:5861;2.62e-10;1!DOID:6496;2.62e-10;1!DOID:0060058;6.94e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.73e-10,1;DOID:4549,1.73e-10,1;DOID:5861,1.73e-10,1;DOID:6496,1.73e-10,1;DOID:0060058,6.50e-09,10;DOID:2531,4.49e-08,51;DOID:0060083,4.49e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.43e-14!94;UBERON:0001016!6.43e-14!94;UBERON:0001017!3.64e-13!82;UBERON:0002346!4.61e-13!90;UBERON:0001049!5.73e-13!57;UBERON:0005068!5.73e-13!57;UBERON:0006241!5.73e-13!57;UBERON:0007135!5.73e-13!57;UBERON:0005743!5.66e-12!86;UBERON:0000955!3.34e-11!69;UBERON:0006238!3.34e-11!69;UBERON:0003075!4.93e-11!86;UBERON:0007284!4.93e-11!86;UBERON:0002616!2.15e-10!59;UBERON:0000153!5.07e-10!129;UBERON:0007811!5.07e-10!129;UBERON:0000924!1.63e-09!173;UBERON:0006601!1.63e-09!173;UBERON:0002020!3.40e-09!34;UBERON:0003528!3.40e-09!34;UBERON:0002780!3.59e-09!41;UBERON:0001890!3.59e-09!41;UBERON:0006240!3.59e-09!41;UBERON:0001869!5.19e-09!32;UBERON:0001893!5.84e-09!34;UBERON:0003080!8.52e-09!42;UBERON:0002791!2.96e-08!33;UBERON:0004121!4.27e-08!169;UBERON:0000033!5.19e-08!123;UBERON:0003056!6.80e-08!61;UBERON:0002619!1.02e-07!22;UBERON:0000956!1.64e-07!25;UBERON:0000203!1.64e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.35e-20;2!UBERON:0005058;9.35e-20;2!UBERON:0009113;9.35e-20;2!UBERON:0001154;2.62e-10;1!UBERON:0001153;2.62e-10;1!UBERON:0009854;2.62e-10;1!UBERON:0004177;1.89e-08;5!UBERON:0005057;1.89e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.51e-10,4;UBERON:0005058,2.51e-10,4;UBERON:0009113,2.51e-10,4;UBERON:0003295,2.51e-10,4;UBERON:0005562,2.51e-10,4;UBERON:0001154,3.29e-10,1;UBERON:0001153,3.29e-10,1;UBERON:0001045,3.29e-10,1;UBERON:0003351,3.66e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0.547497700291537,0,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0,0,0,0,1.54934401160603,0.284338464974843,4.69760702935756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,1.68152568894461,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0.352303495931295,0,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,6.62194649121976,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0.254094624222463,2.60279707715243,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.966782203814463,1.0151168573996,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.995985806877798,0.478278818186467,0.798317485731266,0.191505370132367,1.05836791361941,0.973865820823666,4.49275484981534,0,0,0,0,0,0.403599414382095,1.27753871307098,0,0,0,0,0.19538809540204,1.9488432172667,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0,1.10513566212459,0.503865495708552,0,0.246169610922139,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0.361789315876224,0,1.21637185924347,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,1.85337866052151,0,0,0,0.316553979779393,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,1.22583065500418,0,0.412618309791701,0,0,0,0.182248669974074,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0,0,0.258565912723101,0.52893040697076,0.171086837884329,0,0,0.78602152549833,0,0,0,3.65377795142688,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0.468334905806882,1.01444720027578,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0.327609848846413,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0.895260599125562,1.1860729253635,0,0.218419276384028,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0.0788617450012534,0.80057074828547,0,0,0.513833800771676,0,0,0,0.756215088665154,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0,0.126831620387814,0,0,0,0.527613733078862,0,0,0,0,0.682986574053893,0.177404740325278,0.115233987555779,0,0.883606528698812,0.131545547125698,0,0,0,0.471346769748006,0.280272163313789,0,0,0,0,0.632054446930906,0.813689977576877,0,0,0,0,0,0,0.946656005844523,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,1.87151570769685,0.397901550322736,0,0.22589216407792,0,0.603851374266694,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,2.32520075409622,7.57311514409466,0,0,0.202117188958219,0,0,0.134704106029175,0,0.332660356546013,0,0.213454691755431,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p8@C9orf93 | |||
}} |
Revision as of 00:55, 23 January 2014
Short description: | p8@C9orf93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C9orf93_5end |
Coexpression cluster: | NA |
Association with transcript: | 195bp_to_ENST00000474193_5end |
EntrezGene: | C9orf93 |
HGNC: | 29828 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 8.95e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.51e-10 | 4 |
hemolymphoid system gland | 2.51e-10 | 4 |
thymic region | 2.51e-10 | 4 |
pharyngeal gland | 2.51e-10 | 4 |
thymus primordium | 2.51e-10 | 4 |
vermiform appendix | 3.29e-10 | 1 |
caecum | 3.29e-10 | 1 |
midgut | 3.29e-10 | 1 |
pharyngeal epithelium | 3.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.73e-10 | 1 |
extraosseous chondrosarcoma | 1.73e-10 | 1 |
myxoid chondrosarcoma | 1.73e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.73e-10 | 1 |
lymphoma | 6.50e-09 | 10 |
hematologic cancer | 4.49e-08 | 51 |
immune system cancer | 4.49e-08 | 51 |