FFCP PHASE1:Hg19::chr8:124195016..124195044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28210 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=95bp_to_ENST00000276699,ENST00000522648_5end | |||
|coexpression_cluster_id=C1072 | |||
|description=CAGE_peak_3_at_FAM83A_5end | |||
|id=chr8:124195016..124195044,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.26e-24!254;CL:0002076!1.92e-14!43;CL:0000076!4.38e-10!62;CL:0002368!1.09e-09!13;CL:0000223!9.04e-09!59;CL:0002159!9.82e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.14e-13;14!CL:0002368;1.52e-10;13!CL:0000575;2.63e-09;2!CL:0000764;7.37e-09;2!CL:0000317;7.37e-09;2!CL:1000448;7.37e-09;2!CL:0002308;7.37e-09;2!CL:0002140;7.37e-09;2!CL:0000558;7.37e-09;2!CL:0002202;2.41e-07;9!CL:0002632;2.41e-07;9!CL:0000362;3.70e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.82e-17,253;CL:0002159,5.41e-13,14;CL:0002368,1.91e-10,13;CL:0000575,2.33e-09,2;CL:0000076,3.60e-09,63;CL:0000317,4.30e-09,2;CL:1000448,4.30e-09,2;CL:0002308,4.30e-09,2;CL:0002140,4.30e-09,2;CL:0000764,6.17e-09,2;CL:0000765,6.17e-09,2;CL:0000050,6.17e-09,2;CL:0000038,6.17e-09,2;CL:0000558,6.17e-09,2;CL:0000547,6.17e-09,2;CL:0000549,6.17e-09,2;CL:0000550,6.17e-09,2;CL:0000552,6.17e-09,2;CL:0002076,1.26e-07,42;CL:0002202,2.65e-07,9;CL:0002632,2.65e-07,9;CL:0000362,3.35e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.19e-12!106;DOID:1036!3.64e-11!8;DOID:162!2.27e-10!235;DOID:14566!7.85e-10!239;DOID:0050687!5.72e-09!143;DOID:1749!1.66e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.07e-19;8!DOID:1749;2.50e-09;14!DOID:8692;1.23e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.14e-19,8;DOID:1749,2.77e-09,14;DOID:305,1.13e-08,106;DOID:8692,1.07e-07,31;DOID:162,1.90e-07,235;DOID:14566,3.67e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.18e-13!72;UBERON:0001737!9.78e-13!9;UBERON:0004119!2.44e-12!169;UBERON:0000925!2.44e-12!169;UBERON:0006595!2.44e-12!169;UBERON:0000065!4.02e-12!53;UBERON:0008947!1.16e-11!38;UBERON:0003258!1.16e-11!38;UBERON:0001007!9.07e-09!155;UBERON:0001555!9.07e-09!155;UBERON:0007026!9.07e-09!155;UBERON:0000072!1.09e-08!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.37e-09;2!UBERON:0007771;7.37e-09;2!UBERON:0003297;7.37e-09;2!UBERON:0001821;7.37e-09;2!UBERON:0003487;7.37e-09;2!UBERON:0001820;7.37e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.30e-09,2;UBERON:0007771,4.30e-09,2;UBERON:0003297,4.30e-09,2;UBERON:0001821,4.30e-09,2;UBERON:0003487,4.30e-09,2;UBERON:0001820,4.30e-09,2;UBERON:0005089,4.30e-09,2;UBERON:0005088,4.30e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31326510656075,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91436230634034,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,0.545492241181669,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.674338760312407,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0.686271241194102,1.20725313949488,0,2.6137532827024,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.425325291727159,0.179117045405697,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81721999031168,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,2.85037839639715,1.5686127061494,0,0,0,0,0,0,2.87132768998086,1.95018073810956,0,0,0,0,0,0,0,0.0852266274161009,0,2.47927373041467,0.768760269460425,0.765676274967505,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,2.17781969722645,0,3.87454835404107,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,12.5317238545034,0.169291777801603,0,0,0,0,0,0,0,0,0,84.9303052739215,0.270455678475983,0.66614393599564,0,0,0,0,0,0,0.71623345421307,0,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.359473404589307,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980446171670911,0.697118721393016,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.831058409500782,36.0953056987489,45.878633030351,38.7667865914197,41.9355749320449,6.19852658023477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,1.17590876897253,1.91530254476886,0,0.687944129886466,1.64485763191445,2.99666200053361,1.72442459811739,0.775912131907355,0,0.225980740780532,0.137041924646751,0,0,0,1.92381168603681,0.213452994739353,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0.959575986597226,0,0,0,0,0,0,0,75.3609340478932,0,0,0,0,0,0,0,1.40963004463334,0,0.157204305099666,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0.857766365499703,0.260994291965212,0,0,0,0,5.5584260488975,0,3.7104720648635,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,0,0.366857197043358,0,0,0,0,0.150420656698515,0,0,0,0.327543835020193,1.47856086217045,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0,0,0,3.19123370386714,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0.257831551894309,0,1.42843150884526,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.358611026963382,0,1.46525883499754,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@FAM83A | |||
}} |
Revision as of 23:36, 22 January 2014
Short description: | p3@FAM83A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM83A_5end |
Coexpression cluster: | C1072_leukemia_acute_chronic_Prostate_Keratinocyte_mesothelioma_Gingival |
Association with transcript: | 95bp_to_ENST00000276699, ENST00000522648_5end |
EntrezGene: | FAM83A |
HGNC: | 28210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.82e-17 | 253 |
general ecto-epithelial cell | 5.41e-13 | 14 |
respiratory epithelial cell | 1.91e-10 | 13 |
corneal epithelial cell | 2.33e-09 | 2 |
squamous epithelial cell | 3.60e-09 | 63 |
sebum secreting cell | 4.30e-09 | 2 |
epithelial cell of sweat gland | 4.30e-09 | 2 |
epithelial cell of skin gland | 4.30e-09 | 2 |
acinar cell of sebaceous gland | 4.30e-09 | 2 |
erythroid lineage cell | 6.17e-09 | 2 |
erythroblast | 6.17e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 6.17e-09 | 2 |
erythroid progenitor cell | 6.17e-09 | 2 |
reticulocyte | 6.17e-09 | 2 |
proerythroblast | 6.17e-09 | 2 |
basophilic erythroblast | 6.17e-09 | 2 |
polychromatophilic erythroblast | 6.17e-09 | 2 |
orthochromatic erythroblast | 6.17e-09 | 2 |
endo-epithelial cell | 1.26e-07 | 42 |
epithelial cell of tracheobronchial tree | 2.65e-07 | 9 |
epithelial cell of lower respiratory tract | 2.65e-07 | 9 |
epidermal cell | 3.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.30e-09 | 2 |
epidermis gland | 4.30e-09 | 2 |
gland of integumental system | 4.30e-09 | 2 |
sebaceous gland | 4.30e-09 | 2 |
skin sebaceous gland | 4.30e-09 | 2 |
sweat gland | 4.30e-09 | 2 |
sweat gland placode | 4.30e-09 | 2 |
sebaceous gland placode | 4.30e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.14e-19 | 8 |
squamous cell carcinoma | 2.77e-09 | 14 |
carcinoma | 1.13e-08 | 106 |
myeloid leukemia | 1.07e-07 | 31 |
cancer | 1.90e-07 | 235 |
disease of cellular proliferation | 3.67e-07 | 239 |