FFCP PHASE1:Hg19::chr8:86253920..86253944,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=759 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1368 | |||
|TSSclassifier=weak | |||
|UniProt=P00915,E5RHP7 | |||
|association_with_transcript=0bp_to_ENST00000432364,ENST00000517618,NM_001164830_5end | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_2_at_CA1_5end | |||
|id=chr8:86253920..86253944,- | |||
|ontology_enrichment_celltype=CL:0002231!2.91e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.37e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.77e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.05e-14!129;UBERON:0004185!2.05e-14!129;UBERON:0000059!1.79e-13!11;UBERON:0000160!3.62e-12!27;UBERON:0001007!2.87e-11!155;UBERON:0001555!2.87e-11!155;UBERON:0007026!2.87e-11!155;UBERON:0001155!7.33e-11!9;UBERON:0004119!5.63e-10!169;UBERON:0000925!5.63e-10!169;UBERON:0006595!5.63e-10!169;UBERON:0005409!3.46e-09!35;UBERON:0006562!4.39e-08!11;UBERON:0001154!2.66e-07!1;UBERON:0001153!2.66e-07!1;UBERON:0001046!3.30e-07!19;UBERON:0002084!3.36e-07!1;UBERON:0002082!3.36e-07!1;UBERON:0004706!3.36e-07!1;UBERON:0000989!3.78e-07!1;UBERON:0008811!3.78e-07!1;UBERON:0006258!3.78e-07!1;UBERON:0005876!3.78e-07!1;UBERON:0004874!3.78e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;2.63e-64;11!UBERON:0001155;1.32e-50;9!UBERON:0000160;1.47e-39;17!UBERON:0005409;4.34e-31;22!UBERON:0001154;2.37e-29;1!UBERON:0001153;2.37e-29;1!UBERON:0009854;2.37e-29;1!UBERON:0004907;1.44e-23;5!UBERON:0004921;1.80e-21;33!UBERON:0001007;1.22e-08;81!UBERON:0001555;1.26e-08;54!UBERON:0001052;1.96e-08;4!UBERON:0009856;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,2.63e-64,11;UBERON:0001155,1.32e-50,9;UBERON:0000160,1.47e-39,17;UBERON:0001154,2.37e-29,1;UBERON:0001153,2.37e-29,1;UBERON:0001045,2.37e-29,1;UBERON:0005409,1.45e-27,25;UBERON:0004907,1.44e-23,5;UBERON:0004921,8.24e-09,118;UBERON:0001052,1.96e-08,4;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145;UBERON:0001046,6.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,17.1296027629312,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,287.630698081688,19.1068339327213,90.4324614501766,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,2.82967749179399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,32.8737139383418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.71421575442263,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CA1 | |||
}} |
Revision as of 22:45, 22 January 2014
Short description: | p2@CA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CA1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000432364, ENST00000517618, NM_001164830_5end |
EntrezGene: | CA1 |
HGNC: | 1368 |
UniProt: | P00915E5RHP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 2.63e-64 | 11 |
colon | 1.32e-50 | 9 |
intestine | 1.47e-39 | 17 |
vermiform appendix | 2.37e-29 | 1 |
caecum | 2.37e-29 | 1 |
midgut | 2.37e-29 | 1 |
gastrointestinal system | 1.45e-27 | 25 |
lower digestive tract | 1.44e-23 | 5 |
subdivision of digestive tract | 8.24e-09 | 118 |
rectum | 1.96e-08 | 4 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
hindgut | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.77e-07 | 5 |